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The map label for this gene is atpC [H]

Identifier: 221633210

GI number: 221633210

Start: 1213468

End: 1213923

Strand: Reverse

Name: atpC [H]

Synonym: trd_1227

Alternate gene names: 221633210

Gene position: 1213923-1213468 (Counterclockwise)

Preceding gene: 221633211

Following gene: 221633209

Centisome position: 60.61

GC content: 66.45

Gene sequence:

>456_bases
ATGGCCGGGAAACTCCGGGTGGAAGTGGTAACCGCCGAACGGGTCGTTTATCAGGTCGATGATGCCGATATGGTGATCGC
TCCCGGAGCCGAGGGGACACTCGGGATCTTACCGCGCCATGCCCCCCTCGTCTCGTTGCTGAGTATGGGGGAGATGCGCG
TCAAGCGCGGGCGCGAAGAGGACAGCCTGACGATCTTCGGCGGTTTCCTGGAGGTCGCCAACAACGTCGTGCGTGTGCTG
GCTGACGTGGCGGAGCGGGCCGAAGAGATCGACCTCGCACGGGCGGAGGAGGCGAGACAGCGGGCATTGGCGCGCTTGCG
CGAACGCCGGGCGGACATCGATCGTCGACGTGCCGAAATGGCGCTACGGCGCTCGACCATTCGATTGGCGGTCGGTCGCA
AGCGACGAGCGCGAGCTGGAGTGGGTGGGCCACCGCTCCCCGAGGCGCAACCCTGA

Upstream 100 bases:

>100_bases
GATCACCTGCCAGAGCAGGCCTTCTACATGGTAGGGACGATCGATGAGGCGGTAGAGAAAGCCGAGCAGATGGCGCGCGA
AGCGTGACCGGGGGCGAACG

Downstream 100 bases:

>100_bases
AGGAGGTGGCCGTGGCCATCACGACAGCCACCGAGCGAATCCGGACGATCGGCGGTCGCGTCCTGCGAGGACGTGTCGCG
ATCGGCGGCGCAAAAAATGC

Product: ATP synthase F1 subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAGKLRVEVVTAERVVYQVDDADMVIAPGAEGTLGILPRHAPLVSLLSMGEMRVKRGREEDSLTIFGGFLEVANNVVRVL
ADVAERAEEIDLARAEEARQRALARLRERRADIDRRRAEMALRRSTIRLAVGRKRRARAGVGGPPLPEAQP

Sequences:

>Translated_151_residues
MAGKLRVEVVTAERVVYQVDDADMVIAPGAEGTLGILPRHAPLVSLLSMGEMRVKRGREEDSLTIFGGFLEVANNVVRVL
ADVAERAEEIDLARAEEARQRALARLRERRADIDRRRAEMALRRSTIRLAVGRKRRARAGVGGPPLPEAQP
>Mature_150_residues
AGKLRVEVVTAERVVYQVDDADMVIAPGAEGTLGILPRHAPLVSLLSMGEMRVKRGREEDSLTIFGGFLEVANNVVRVLA
DVAERAEEIDLARAEEARQRALARLRERRADIDRRRAEMALRRSTIRLAVGRKRRARAGVGGPPLPEAQP

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=132, Percent_Identity=35.6060606060606, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 16672; Mature: 16540

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKLRVEVVTAERVVYQVDDADMVIAPGAEGTLGILPRHAPLVSLLSMGEMRVKRGREE
CCCCEEEEEEEECEEEEEECCCCEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCC
DSLTIFGGFLEVANNVVRVLADVAERAEEIDLARAEEARQRALARLRERRADIDRRRAEM
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRRSTIRLAVGRKRRARAGVGGPPLPEAQP
HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGKLRVEVVTAERVVYQVDDADMVIAPGAEGTLGILPRHAPLVSLLSMGEMRVKRGREE
CCCEEEEEEEECEEEEEECCCCEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCC
DSLTIFGGFLEVANNVVRVLADVAERAEEIDLARAEEARQRALARLRERRADIDRRRAEM
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRRSTIRLAVGRKRRARAGVGGPPLPEAQP
HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA