Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633207

Identifier: 221633207

GI number: 221633207

Start: 1211050

End: 1211529

Strand: Reverse

Name: 221633207

Synonym: trd_1224

Alternate gene names: NA

Gene position: 1211529-1211050 (Counterclockwise)

Preceding gene: 221633208

Following gene: 221633206

Centisome position: 60.49

GC content: 65.83

Gene sequence:

>480_bases
ATGGAGCAGATCGATATCGCGGCGTTCGTGCGGATCGTGCTGCGGCTCGTCCATGCTCTCGCCGGCGCCATCTGGCTCGG
CAGCGGAGCATATCTTCTCGTCGCACTGACTCCGTTACGAGGAGTCGTGACCAGCGCACAGGACACGCTGCGAGCTGCGC
AACTGCGTTTTCGCCGTTGGTGGGTGATAGCCAGCGCGCTGTTGCTCGGATCAGGTGTTGCGCTCATGTTCGACCGGCTG
GCCGATGGTCGGGGTACGGCGCTGTACGTGATCCTCTTGCTGGTCAAGGTCGCGGCTGGCCTCCTCGCGCTCGCCGCCAC
CGGCGGGCTTCTACCCCGCGGCGCTTCCTGGGAGAGAGGGAGTGCGACGCGAGCGTGGCTGAGCGGTCGAACGGTGCTCC
TGCTCGGGACACTCGCCTATCTGCTCGGTGTACTCTTATCGGTGATCTATCCGCCGGACCCGACCGCGGGCTGGCGGTGA

Upstream 100 bases:

>100_bases
CGGGAAGTACACCGGCCCACTCAAGTCGGCCGATCAACTTCTGAGCATCCTCGCGGAACTCGGTATTACCCTCAGCCCGA
TGCGCTGAAGGATGCACCGA

Downstream 100 bases:

>100_bases
CGGACGGTACCGAGGCGAGCGGGGGCTGATCGATGAGTACGGCTGTTGCGACCCGTAGCGGGGCTCGTCGGATTCGCCTG
GATGTTCGTCTGCTCGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEQIDIAAFVRIVLRLVHALAGAIWLGSGAYLLVALTPLRGVVTSAQDTLRAAQLRFRRWWVIASALLLGSGVALMFDRL
ADGRGTALYVILLLVKVAAGLLALAATGGLLPRGASWERGSATRAWLSGRTVLLLGTLAYLLGVLLSVIYPPDPTAGWR

Sequences:

>Translated_159_residues
MEQIDIAAFVRIVLRLVHALAGAIWLGSGAYLLVALTPLRGVVTSAQDTLRAAQLRFRRWWVIASALLLGSGVALMFDRL
ADGRGTALYVILLLVKVAAGLLALAATGGLLPRGASWERGSATRAWLSGRTVLLLGTLAYLLGVLLSVIYPPDPTAGWR
>Mature_159_residues
MEQIDIAAFVRIVLRLVHALAGAIWLGSGAYLLVALTPLRGVVTSAQDTLRAAQLRFRRWWVIASALLLGSGVALMFDRL
ADGRGTALYVILLLVKVAAGLLALAATGGLLPRGASWERGSATRAWLSGRTVLLLGTLAYLLGVLLSVIYPPDPTAGWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16915; Mature: 16915

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIDIAAFVRIVLRLVHALAGAIWLGSGAYLLVALTPLRGVVTSAQDTLRAAQLRFRRW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
WVIASALLLGSGVALMFDRLADGRGTALYVILLLVKVAAGLLALAATGGLLPRGASWERG
HHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SATRAWLSGRTVLLLGTLAYLLGVLLSVIYPPDPTAGWR
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEQIDIAAFVRIVLRLVHALAGAIWLGSGAYLLVALTPLRGVVTSAQDTLRAAQLRFRRW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
WVIASALLLGSGVALMFDRLADGRGTALYVILLLVKVAAGLLALAATGGLLPRGASWERG
HHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SATRAWLSGRTVLLLGTLAYLLGVLLSVIYPPDPTAGWR
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA