Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633137

Identifier: 221633137

GI number: 221633137

Start: 1141793

End: 1142035

Strand: Reverse

Name: 221633137

Synonym: trd_1153

Alternate gene names: NA

Gene position: 1142035-1141793 (Counterclockwise)

Preceding gene: 221633140

Following gene: 221633136

Centisome position: 57.02

GC content: 63.37

Gene sequence:

>243_bases
ATGGATCTCCAGGACAGCGTCGTGAAGGAATTGGAGCAGCGAGGATGCGAGGTGGTACGCCGGACGAGTGCGCTCGTCTT
CCTCGTTCACCCCGAATCTCCCGGCATCATGGTGCGTGTCGGGACGGTGTACGTCGTCGCGGAAACGAGCGAAGCTGAGA
TCGTGCGCCAGCGGCTCGACCGATTCGATGCCGCTTCCTTCGTTAGCCAGCTGCGGGCGTACGAGACTGGGCGGGCGCGA
TGA

Upstream 100 bases:

>100_bases
TGAGGCAGCTACGAAAACTGCTCTCCACTGGTATCGCTTTCCCATAGAAAGACGCTCGGTCGGTTACCGGCAGAGGTTAG
ACTTCATTCGGAGGCTGCCC

Downstream 100 bases:

>100_bases
ACTCAGGTCAACGATTGGCGAGATTCGCCCCCGGAGCCGTCGTCGGCCTCCTCTGGGGAATCTTCCTGCTCCTCGTGGAG
TCGCTCGTCGGCGCCGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDLQDSVVKELEQRGCEVVRRTSALVFLVHPESPGIMVRVGTVYVVAETSEAEIVRQRLDRFDAASFVSQLRAYETGRAR

Sequences:

>Translated_80_residues
MDLQDSVVKELEQRGCEVVRRTSALVFLVHPESPGIMVRVGTVYVVAETSEAEIVRQRLDRFDAASFVSQLRAYETGRAR
>Mature_80_residues
MDLQDSVVKELEQRGCEVVRRTSALVFLVHPESPGIMVRVGTVYVVAETSEAEIVRQRLDRFDAASFVSQLRAYETGRAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9025; Mature: 9025

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQDSVVKELEQRGCEVVRRTSALVFLVHPESPGIMVRVGTVYVVAETSEAEIVRQRLD
CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECEEEEEEECCHHHHHHHHHH
RFDAASFVSQLRAYETGRAR
HCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDLQDSVVKELEQRGCEVVRRTSALVFLVHPESPGIMVRVGTVYVVAETSEAEIVRQRLD
CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECEEEEEEECCHHHHHHHHHH
RFDAASFVSQLRAYETGRAR
HCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA