Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633104

Identifier: 221633104

GI number: 221633104

Start: 1102532

End: 1103959

Strand: Reverse

Name: 221633104

Synonym: trd_1120

Alternate gene names: NA

Gene position: 1103959-1102532 (Counterclockwise)

Preceding gene: 221633105

Following gene: 221633100

Centisome position: 55.12

GC content: 63.73

Gene sequence:

>1428_bases
TTGAGCTGGCGCGCTCATCTCCTGCGCGTCGCCCTTTTCAGTCTTCCTTTCCTGGCGCTCGCGCTGGTGACGTATCGGTA
CGGATTTTTGACGAATGCGCACGCGCACGTCACCGCGAAGGCCTTGCTGGCAGCCGACCGTTTGCGCTTGGAGGTCATCG
GTTTCCTGTATCCGCCGCTGCCGTTCTTGCTGGTGCTCGTGTTCCCGCGGCCGTGGCTTCCGAGCGTGCTGGCGAGTATT
GCGGCAGGGGCGACTGCCTGGCTCGTCTGGTACGACTTGGAACGAGTTGGATTGGCTCGCCTTTGGCGGATGCTCCTGCT
GGCTGCGGTCGTCGTGATTCCTTCGAACGTCTTTCTCGCGACGCAGGCGTATCCGGACATGCTGGCGCTGCACCTGATCG
TCGTGGCCTGGCACTATTACATCAATTTCGTTCGTCATGGCCACACCTTCAGCGGTTTCGTGGCAGGCCTGATACTCGGA
CTCGCCTTTTACGCCAACTTCTATGCACTCGTCTATGCGCTCGCGCTGGCGAGTCTGGTACCGCTCTTTCGCCGGTCGGA
AGCGAGCACGGGGCAGGGCGGGGAATGGGCTACCCTGAGCCAGATGCTGGTGACGGCTTTCCCCGCTCTCTGGGCTGTGG
CGAGCTGGACCTACATCAACTGGGTTTTCACCGGTAACCCGATGATGTATCTGACGGACCCGGCCGCTGCAGTGATCGAT
CCAGAGCGGTGGGGAGTGCCGCTGGCGGAACGCTGGGGTTGGCTCGCGGAGTTCGGCCGCGAACTCATCATGCAGCCGCT
GCTCCTCGGAGTGTTCGCTGCCAATCTCTGGCGGGCGCCCCGACGCCTCGTACCACTCGCCGTTCTCGCGTTCGTTCCCA
GTCTGTTGCGGTTTTTCGGGTTCGCCTATCCGTTGCCGCTCGTCCTTGCAACCTATACCGTCCTTGCGCTGATCGCGCTG
CCGGAACGTTTGCCGCGCTGGGTGGGACCCGTCATCGTCGCGCTCGCGCTCGGACAAGGTGCGACCACGGCGGTGTTGCT
GCAGCATGCAGGCGAAGTTCGGCAGTGGCAGCAGGTTCTCGTCAACGGTATCCCGCGAGCGAGCGATCAGGACGAACGGG
AGCTCGGCCAGCGTTTGCGAGCGGCTCCACCGTATTCGATTCTGGCCGATGATCGGAGTGCCTATCGCATCATCGCGCGT
GCGGAGACAGCCCGACCGTTCCTGCTGCCGGCCGATGCGTCCTTCGGGGCGGCGCTTGCCGAGCCGGCCCGCTCTGTCGG
GTACATCCTCGTGACGCAGGAGCCGCTCGGTCGCGATCTGGTCAGCGAGCGGTTTGCAGACGGTCCGCCGGACGGCTTCG
TGGTCGACGGACAGCAGGGATCATGGAAACTCTACCGGCGGATCGATCAGCCGAGTCTCCTGCACTGA

Upstream 100 bases:

>100_bases
CCCTTCTACTGGGAGAAGACGCGTCATGGCCTCAGCCGTTATCTCGAAACCGGTTCCGCAGCCAGCGTCGCCGCCGAGTG
ACGAGCTCCGTCTCGTCGAT

Downstream 100 bases:

>100_bases
GCCGAGCAGTCGTTGCGACGCGTTCAGCTTCGTGTCCTTCGCTCCTGCTCGCTGTTCTCGAGCGGTGACCGGGGCGTCTT
GCATACCCAGTCGCACTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MSWRAHLLRVALFSLPFLALALVTYRYGFLTNAHAHVTAKALLAADRLRLEVIGFLYPPLPFLLVLVFPRPWLPSVLASI
AAGATAWLVWYDLERVGLARLWRMLLLAAVVVIPSNVFLATQAYPDMLALHLIVVAWHYYINFVRHGHTFSGFVAGLILG
LAFYANFYALVYALALASLVPLFRRSEASTGQGGEWATLSQMLVTAFPALWAVASWTYINWVFTGNPMMYLTDPAAAVID
PERWGVPLAERWGWLAEFGRELIMQPLLLGVFAANLWRAPRRLVPLAVLAFVPSLLRFFGFAYPLPLVLATYTVLALIAL
PERLPRWVGPVIVALALGQGATTAVLLQHAGEVRQWQQVLVNGIPRASDQDERELGQRLRAAPPYSILADDRSAYRIIAR
AETARPFLLPADASFGAALAEPARSVGYILVTQEPLGRDLVSERFADGPPDGFVVDGQQGSWKLYRRIDQPSLLH

Sequences:

>Translated_475_residues
MSWRAHLLRVALFSLPFLALALVTYRYGFLTNAHAHVTAKALLAADRLRLEVIGFLYPPLPFLLVLVFPRPWLPSVLASI
AAGATAWLVWYDLERVGLARLWRMLLLAAVVVIPSNVFLATQAYPDMLALHLIVVAWHYYINFVRHGHTFSGFVAGLILG
LAFYANFYALVYALALASLVPLFRRSEASTGQGGEWATLSQMLVTAFPALWAVASWTYINWVFTGNPMMYLTDPAAAVID
PERWGVPLAERWGWLAEFGRELIMQPLLLGVFAANLWRAPRRLVPLAVLAFVPSLLRFFGFAYPLPLVLATYTVLALIAL
PERLPRWVGPVIVALALGQGATTAVLLQHAGEVRQWQQVLVNGIPRASDQDERELGQRLRAAPPYSILADDRSAYRIIAR
AETARPFLLPADASFGAALAEPARSVGYILVTQEPLGRDLVSERFADGPPDGFVVDGQQGSWKLYRRIDQPSLLH
>Mature_474_residues
SWRAHLLRVALFSLPFLALALVTYRYGFLTNAHAHVTAKALLAADRLRLEVIGFLYPPLPFLLVLVFPRPWLPSVLASIA
AGATAWLVWYDLERVGLARLWRMLLLAAVVVIPSNVFLATQAYPDMLALHLIVVAWHYYINFVRHGHTFSGFVAGLILGL
AFYANFYALVYALALASLVPLFRRSEASTGQGGEWATLSQMLVTAFPALWAVASWTYINWVFTGNPMMYLTDPAAAVIDP
ERWGVPLAERWGWLAEFGRELIMQPLLLGVFAANLWRAPRRLVPLAVLAFVPSLLRFFGFAYPLPLVLATYTVLALIALP
ERLPRWVGPVIVALALGQGATTAVLLQHAGEVRQWQQVLVNGIPRASDQDERELGQRLRAAPPYSILADDRSAYRIIARA
ETARPFLLPADASFGAALAEPARSVGYILVTQEPLGRDLVSERFADGPPDGFVVDGQQGSWKLYRRIDQPSLLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52696; Mature: 52565

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRAHLLRVALFSLPFLALALVTYRYGFLTNAHAHVTAKALLAADRLRLEVIGFLYPPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
PFLLVLVFPRPWLPSVLASIAAGATAWLVWYDLERVGLARLWRMLLLAAVVVIPSNVFLA
HHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TQAYPDMLALHLIVVAWHYYINFVRHGHTFSGFVAGLILGLAFYANFYALVYALALASLV
ECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLFRRSEASTGQGGEWATLSQMLVTAFPALWAVASWTYINWVFTGNPMMYLTDPAAAVID
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCHHEEC
PERWGVPLAERWGWLAEFGRELIMQPLLLGVFAANLWRAPRRLVPLAVLAFVPSLLRFFG
HHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FAYPLPLVLATYTVLALIALPERLPRWVGPVIVALALGQGATTAVLLQHAGEVRQWQQVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VNGIPRASDQDERELGQRLRAAPPYSILADDRSAYRIIARAETARPFLLPADASFGAALA
HHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHEEEEECCCCCCEEEECCCCCCHHHH
EPARSVGYILVTQEPLGRDLVSERFADGPPDGFVVDGQQGSWKLYRRIDQPSLLH
HHHHHCCEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SWRAHLLRVALFSLPFLALALVTYRYGFLTNAHAHVTAKALLAADRLRLEVIGFLYPPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHH
PFLLVLVFPRPWLPSVLASIAAGATAWLVWYDLERVGLARLWRMLLLAAVVVIPSNVFLA
HHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TQAYPDMLALHLIVVAWHYYINFVRHGHTFSGFVAGLILGLAFYANFYALVYALALASLV
ECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLFRRSEASTGQGGEWATLSQMLVTAFPALWAVASWTYINWVFTGNPMMYLTDPAAAVID
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCHHEEC
PERWGVPLAERWGWLAEFGRELIMQPLLLGVFAANLWRAPRRLVPLAVLAFVPSLLRFFG
HHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FAYPLPLVLATYTVLALIALPERLPRWVGPVIVALALGQGATTAVLLQHAGEVRQWQQVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VNGIPRASDQDERELGQRLRAAPPYSILADDRSAYRIIARAETARPFLLPADASFGAALA
HHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHEEEEECCCCCCEEEECCCCCCHHHH
EPARSVGYILVTQEPLGRDLVSERFADGPPDGFVVDGQQGSWKLYRRIDQPSLLH
HHHHHCCEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA