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The map label for this gene is sgcX [C]

Identifier: 221633048

GI number: 221633048

Start: 1036425

End: 1037546

Strand: Reverse

Name: sgcX [C]

Synonym: trd_1063

Alternate gene names: 221633048

Gene position: 1037546-1036425 (Counterclockwise)

Preceding gene: 221633052

Following gene: 221633046

Centisome position: 51.8

GC content: 60.16

Gene sequence:

>1122_bases
ATGAACAGGCCGGAACAGAGTCGGGCGGCCGAGAAGGAGCAACTGTACCAGCTAGTCCAAGAACTCGCGCAACTCGATGG
CGTCTCAGGCCACGAACAAGCAGTTGTGGCTCGACTGGTAGACCTCTTGCGCCCGTTTGCTGCGTCACTCGAGGTCGATT
CGTTCGGTAACCTGTTCGCTTGGCTTCCTTCGCGCGCTTCGCGACCGGTCCTGATGATCTCTGCGCACTCTGACGAGATT
GGGTTGCTCGTCAAGGGAATCGAGCCGAACGGCTTCCTGCGAGTGGAGAAGATCGGTGGTGTGGTCGATAGCTTGCTTCC
GGGGCGGCGCGTACGCGTCCGTGGTTACCGCGGGGTGATCGGGGTTCGTCCGGGCCATCTCCAAACAGCTGAAGAGCAGC
GTTCTGTGCCACCGGTTCGTGAACTGTATGTCGACTTGGGTTATGACTCAGCCGAAGCAGTTCGGTCGCTCGGCATAGAG
ATCGGCGATCCCATCGCCTATGATGAGCCGGTGGAGCGACTCGCTAATCCCGAACGCATCTGTGGGAAGGCACTGGATAA
CCGTATCTCTTGTGCTGTACTCGTGCGTCTTGCCGAGCGACTTCGCGGGGCCGAACTACGGTGCCAACCTGTTCTCGTGG
TCACGGTTCAAGAAGAAGTTGGTCTTCGTGGTGCGCAGATGGCCGCATACCGTCTTGCCCCAGATGCCGCCATCGTCGTG
GACACGGTGCCAGCCGGCGGAACTCCAGATACGGACTTGGTGAAAGACTTGGGTATTCGCCTGGGTGAGGGACCGGTGCT
GGCGCTGGCCAGCGGGATGGGGGGCGTGCGCGGACATCTGGCTCATCCGGGTATGCGAGATTTTCTCGTTCGGGTGGCAG
CGGAACACGGTATTCCGATTCAACGTGCCTTGTTCCCACGGAGCACGTCCGATCTGGCAGCTATCCATCTCGCTCGGGGC
GGTATACCCTCTATGGTCGTCAATATCGCTCGGCGATACTCCCATAGTCCAGTGGAGACGCTCGATTTGGAAGATGTGGC
CGCGACGCTCGACCTGTTGGAAGCGGCGGTACGCTCCTTCGACGAGACGGTGCGGTTCTCCTTCCTCGCTCGTACCGAGT
GA

Upstream 100 bases:

>100_bases
GGACGAGTCGCCACATGGCGCACCTCGGCTTACGGGACTGGCGCTTGATAGTATAACGCGCTGAGTCAGGTCCAGGTACA
CAGGATGGAGGAGTGACCAC

Downstream 100 bases:

>100_bases
GGGTGGCGAGTCTCAAGCCCCCAAGGAGCGGTGCATTCGCTCGTATGCCGAGCGGAGCCCGTACAAGGTGAGATCCGCTT
CGACGGCACTGAATTCGGGC

Product: putative sgc region protein sgcX

Products: D-glucose; GDP

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MNRPEQSRAAEKEQLYQLVQELAQLDGVSGHEQAVVARLVDLLRPFAASLEVDSFGNLFAWLPSRASRPVLMISAHSDEI
GLLVKGIEPNGFLRVEKIGGVVDSLLPGRRVRVRGYRGVIGVRPGHLQTAEEQRSVPPVRELYVDLGYDSAEAVRSLGIE
IGDPIAYDEPVERLANPERICGKALDNRISCAVLVRLAERLRGAELRCQPVLVVTVQEEVGLRGAQMAAYRLAPDAAIVV
DTVPAGGTPDTDLVKDLGIRLGEGPVLALASGMGGVRGHLAHPGMRDFLVRVAAEHGIPIQRALFPRSTSDLAAIHLARG
GIPSMVVNIARRYSHSPVETLDLEDVAATLDLLEAAVRSFDETVRFSFLARTE

Sequences:

>Translated_373_residues
MNRPEQSRAAEKEQLYQLVQELAQLDGVSGHEQAVVARLVDLLRPFAASLEVDSFGNLFAWLPSRASRPVLMISAHSDEI
GLLVKGIEPNGFLRVEKIGGVVDSLLPGRRVRVRGYRGVIGVRPGHLQTAEEQRSVPPVRELYVDLGYDSAEAVRSLGIE
IGDPIAYDEPVERLANPERICGKALDNRISCAVLVRLAERLRGAELRCQPVLVVTVQEEVGLRGAQMAAYRLAPDAAIVV
DTVPAGGTPDTDLVKDLGIRLGEGPVLALASGMGGVRGHLAHPGMRDFLVRVAAEHGIPIQRALFPRSTSDLAAIHLARG
GIPSMVVNIARRYSHSPVETLDLEDVAATLDLLEAAVRSFDETVRFSFLARTE
>Mature_373_residues
MNRPEQSRAAEKEQLYQLVQELAQLDGVSGHEQAVVARLVDLLRPFAASLEVDSFGNLFAWLPSRASRPVLMISAHSDEI
GLLVKGIEPNGFLRVEKIGGVVDSLLPGRRVRVRGYRGVIGVRPGHLQTAEEQRSVPPVRELYVDLGYDSAEAVRSLGIE
IGDPIAYDEPVERLANPERICGKALDNRISCAVLVRLAERLRGAELRCQPVLVVTVQEEVGLRGAQMAAYRLAPDAAIVV
DTVPAGGTPDTDLVKDLGIRLGEGPVLALASGMGGVRGHLAHPGMRDFLVRVAAEHGIPIQRALFPRSTSDLAAIHLARG
GIPSMVVNIARRYSHSPVETLDLEDVAATLDLLEAAVRSFDETVRFSFLARTE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI87082417, Length=350, Percent_Identity=34.5714285714286, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790332, Length=344, Percent_Identity=31.3953488372093, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1788727, Length=350, Percent_Identity=31.1428571428571, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: 3.2.1.4

Molecular weight: Translated: 40393; Mature: 40393

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPEQSRAAEKEQLYQLVQELAQLDGVSGHEQAVVARLVDLLRPFAASLEVDSFGNLFA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
WLPSRASRPVLMISAHSDEIGLLVKGIEPNGFLRVEKIGGVVDSLLPGRRVRVRGYRGVI
HCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCEE
GVRPGHLQTAEEQRSVPPVRELYVDLGYDSAEAVRSLGIEIGDPIAYDEPVERLANPERI
ECCCCCCCCCHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHH
CGKALDNRISCAVLVRLAERLRGAELRCQPVLVVTVQEEVGLRGAQMAAYRLAPDAAIVV
HHHHHCCHHHHHHHHHHHHHHCCCCCEECEEEEEEECHHHCCCHHHHHHEEECCCCEEEE
DTVPAGGTPDTDLVKDLGIRLGEGPVLALASGMGGVRGHLAHPGMRDFLVRVAAEHGIPI
EECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCH
QRALFPRSTSDLAAIHLARGGIPSMVVNIARRYSHSPVETLDLEDVAATLDLLEAAVRSF
HHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
DETVRFSFLARTE
HHHHHHHEEECCC
>Mature Secondary Structure
MNRPEQSRAAEKEQLYQLVQELAQLDGVSGHEQAVVARLVDLLRPFAASLEVDSFGNLFA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
WLPSRASRPVLMISAHSDEIGLLVKGIEPNGFLRVEKIGGVVDSLLPGRRVRVRGYRGVI
HCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCEE
GVRPGHLQTAEEQRSVPPVRELYVDLGYDSAEAVRSLGIEIGDPIAYDEPVERLANPERI
ECCCCCCCCCHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHH
CGKALDNRISCAVLVRLAERLRGAELRCQPVLVVTVQEEVGLRGAQMAAYRLAPDAAIVV
HHHHHCCHHHHHHHHHHHHHHCCCCCEECEEEEEEECHHHCCCHHHHHHEEECCCCEEEE
DTVPAGGTPDTDLVKDLGIRLGEGPVLALASGMGGVRGHLAHPGMRDFLVRVAAEHGIPI
EECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCH
QRALFPRSTSDLAAIHLARGGIPSMVVNIARRYSHSPVETLDLEDVAATLDLLEAAVRSF
HHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
DETVRFSFLARTE
HHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPglucose; H2O

Specific reaction: GDP-glucose + H2O = D-glucose + GDP

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]