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The map label for this gene is 221633009

Identifier: 221633009

GI number: 221633009

Start: 988482

End: 988931

Strand: Reverse

Name: 221633009

Synonym: trd_1024

Alternate gene names: NA

Gene position: 988931-988482 (Counterclockwise)

Preceding gene: 221633010

Following gene: 221633008

Centisome position: 49.37

GC content: 64.0

Gene sequence:

>450_bases
ATGCTGATCGTGCGGCGTGGCACGCGTCAGGAGCGTGACCGGATCCGGCAAGAGATCGTGGAAGCTTTCCAGACGTGGTA
CGTCGGTTTCTCGCCGCTCCTGCGGATGGCGGCGCGCCCTTGGCGTCCGCCGCTCGAAGTCTATGAAGACGAGCGGGGTT
TGGTCGTCCGGGCGGAACTCGCTGGCCTGCGCGAAGACGAGATCGAGGTGATCGTGAACGACTCGACGCTCCAGATCTCG
GGAGTCCGCAGGCCGCGCGAGGAAGGACAGCGGCGGACCTATCACGAGATGGGGATCGCGTACGGACCCTTCGAGGCTGA
AGTCTTGCTACCCTTTCCTGTTGACCTCGATGCGGTGGAAGCGATCTACGAGCGTGGATTTCTGGAGGTTCGCCTGCCGC
GGCTCAGTCATACGCGGACTGTCCCGCTCCGACCCGCGACTGAACCCTGA

Upstream 100 bases:

>100_bases
AGCGATACCGGGTGGTGGTATACTGCCAAGCGGAGTTGGCCGGATCGAGAGAGCGCCGTGATCCGGGAGCGGCGCGAGGC
AATGAAGGGGGCATCGAAGC

Downstream 100 bases:

>100_bases
ATTAGAGGAGTCGATCGATGATGGACGAACTGCGTAACCGAGAATTGGAAGCACGGAAAGAGGAAACGGTCGAGAACGAG
GAGGCGGTCGAGCAGGAAGT

Product: putative heat shock protein, Hsp20 family

Products: NA

Alternate protein names: Heat Shock Protein; Molecular Chaperone; HSP20 Family Protein; Small Heat Shock Protein; Hsp20/Alpha Crystallin Family; Small Heat Shock Protein Hsp; Molecular Chaperone Heat Shock; Alpha-Crystallin/Hsp20 Family ATP-Independent Chaperone

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLIVRRGTRQERDRIRQEIVEAFQTWYVGFSPLLRMAARPWRPPLEVYEDERGLVVRAELAGLREDEIEVIVNDSTLQIS
GVRRPREEGQRRTYHEMGIAYGPFEAEVLLPFPVDLDAVEAIYERGFLEVRLPRLSHTRTVPLRPATEP

Sequences:

>Translated_149_residues
MLIVRRGTRQERDRIRQEIVEAFQTWYVGFSPLLRMAARPWRPPLEVYEDERGLVVRAELAGLREDEIEVIVNDSTLQIS
GVRRPREEGQRRTYHEMGIAYGPFEAEVLLPFPVDLDAVEAIYERGFLEVRLPRLSHTRTVPLRPATEP
>Mature_149_residues
MLIVRRGTRQERDRIRQEIVEAFQTWYVGFSPLLRMAARPWRPPLEVYEDERGLVVRAELAGLREDEIEVIVNDSTLQIS
GVRRPREEGQRRTYHEMGIAYGPFEAEVLLPFPVDLDAVEAIYERGFLEVRLPRLSHTRTVPLRPATEP

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17381; Mature: 17381

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVRRGTRQERDRIRQEIVEAFQTWYVGFSPLLRMAARPWRPPLEVYEDERGLVVRAEL
CEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHEECCCCEEEEEEC
AGLREDEIEVIVNDSTLQISGVRRPREEGQRRTYHEMGIAYGPFEAEVLLPFPVDLDAVE
CCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCEECCCCCEEEEECCCCHHHHH
AIYERGFLEVRLPRLSHTRTVPLRPATEP
HHHHCCCEEEECCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MLIVRRGTRQERDRIRQEIVEAFQTWYVGFSPLLRMAARPWRPPLEVYEDERGLVVRAEL
CEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHEECCCCEEEEEEC
AGLREDEIEVIVNDSTLQISGVRRPREEGQRRTYHEMGIAYGPFEAEVLLPFPVDLDAVE
CCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCEECCCCCEEEEECCCCHHHHH
AIYERGFLEVRLPRLSHTRTVPLRPATEP
HHHHCCCEEEECCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA