| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632933
Identifier: 221632933
GI number: 221632933
Start: 915743
End: 915880
Strand: Reverse
Name: 221632933
Synonym: trd_0937
Alternate gene names: NA
Gene position: 915880-915743 (Counterclockwise)
Preceding gene: 221632935
Following gene: 221632932
Centisome position: 45.73
GC content: 59.42
Gene sequence:
>138_bases GTGAGCTGCTCGCGTGCTTCTCTGGAACGGTGGACTTCGCTCGCTCCGGTCCATCTCGAGAACGAGGTCGACCAGATACT GATGCCCGATCCTCCTATCGCTGCACGTCGTCTGCTCGTGTCGTCCCTTTCTGGATGA
Upstream 100 bases:
>100_bases GCGCTTTTCGTTTACCTCGCGCTCGTCACGCCTCGCCTGGGACGTCGATCTTCTTCCGCACTCCGCGTCGGTCCTACTCT CTGATGCCAGCCCGAGCAGA
Downstream 100 bases:
>100_bases ATGCTTCTTCCTTCGAACATCCGGTGGATGAGCCGACAGCGAGTGCCAGCCGGCTCGCGTAAGTGCCTGGTGCGATTGCG GATGACGCGGCTCCTCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MSCSRASLERWTSLAPVHLENEVDQILMPDPPIAARRLLVSSLSG
Sequences:
>Translated_45_residues MSCSRASLERWTSLAPVHLENEVDQILMPDPPIAARRLLVSSLSG >Mature_44_residues SCSRASLERWTSLAPVHLENEVDQILMPDPPIAARRLLVSSLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4948; Mature: 4817
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCSRASLERWTSLAPVHLENEVDQILMPDPPIAARRLLVSSLSG CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SCSRASLERWTSLAPVHLENEVDQILMPDPPIAARRLLVSSLSG CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA