| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632931
Identifier: 221632931
GI number: 221632931
Start: 914950
End: 915192
Strand: Reverse
Name: 221632931
Synonym: trd_0935
Alternate gene names: NA
Gene position: 915192-914950 (Counterclockwise)
Preceding gene: 221632932
Following gene: 221632921
Centisome position: 45.69
GC content: 60.08
Gene sequence:
>243_bases GTGACCGTGGATGGCACAGTCGAGATCGGACAAGCGAAGGTCAGGCGCAACGAGGACTGGTGCTCCCGCGAGCTGTGTCC GCTTCACTCTCCCAGGGGAATATGGTTCTACTGGCCAGAGAAGCTGGTGAACAAGTTCGGAACCGACTCGGAAGATGTCA TGCGATTCGGCTCGGAGGCGATGAGTACCCACGTCTGCAAGTCCGCCATCCTGACCGCGCTCCGCTGCCAGCTCGGGCTA TAA
Upstream 100 bases:
>100_bases GCTCGACGGCGTTCGATGGGTTCCACGCATCATTGTGGAGTCTTCGACCGCGGCCCGGTTTTCGAGGAGCCTCACCGATT ACAGGCGATCAGTGTTTTCG
Downstream 100 bases:
>100_bases CAAAGCGCCACTATGGATCCCGCTGAACCCCAGCGGTCTACCACGCCGATGAGGTCAAGAGCTGACTCGCCCCACCGGTC TGGGTCTCGCTCTCACCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MTVDGTVEIGQAKVRRNEDWCSRELCPLHSPRGIWFYWPEKLVNKFGTDSEDVMRFGSEAMSTHVCKSAILTALRCQLGL
Sequences:
>Translated_80_residues MTVDGTVEIGQAKVRRNEDWCSRELCPLHSPRGIWFYWPEKLVNKFGTDSEDVMRFGSEAMSTHVCKSAILTALRCQLGL >Mature_79_residues TVDGTVEIGQAKVRRNEDWCSRELCPLHSPRGIWFYWPEKLVNKFGTDSEDVMRFGSEAMSTHVCKSAILTALRCQLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9104; Mature: 8972
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDGTVEIGQAKVRRNEDWCSRELCPLHSPRGIWFYWPEKLVNKFGTDSEDVMRFGSEA CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHH MSTHVCKSAILTALRCQLGL HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVDGTVEIGQAKVRRNEDWCSRELCPLHSPRGIWFYWPEKLVNKFGTDSEDVMRFGSEA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCCCHHHHHHHHHHH MSTHVCKSAILTALRCQLGL HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA