Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632921

Identifier: 221632921

GI number: 221632921

Start: 905229

End: 906140

Strand: Reverse

Name: 221632921

Synonym: trd_0922

Alternate gene names: NA

Gene position: 906140-905229 (Counterclockwise)

Preceding gene: 221632931

Following gene: 221632918

Centisome position: 45.24

GC content: 61.62

Gene sequence:

>912_bases
ATGATGGCAGAAGGGCAATACGTTCTCAGGGTAGAAAGCAGTCGAAACGACTTTGTGATCGGGCTCGGCTTCGCAGTTGC
CGGGGTATTGGCTGTATCGACGAGTGCTGTTCTGATCCGGCTCGCCGGGTCGGTCAGTGCCTTCGAAATCGCTTTTTGGC
GCCTCCTCGTGGCAACGCTCGCGTTGGTGCCGGTCGCACTGGCTACTCGCACGTTGGGGGCAGTGAGGTCGCTCGGCTGG
CCCCGGCTCGCGATCTACGGAGCGACGCTGGCGGTGCACTTCGTGGCGTACAATGCTGCACTGCAATTCGCGCCGGTCGC
GCATGTGTTGCCCTTGCTCTATACGTCCACGATCATGCTCGCCATACTCTCGGCGTTTCTGCTGAAAGAGTCGCTCAGAC
CGCGACAGATCGCGGGAATCGTGATCGTCCTCTCGGGAGTCGTCGTTCTCACTGGGTTCGAGCCACGCTTTGGGCTGCGC
ATCGCTATCGGCGATGGGTTGGCCCTCCTCTCGGCCGCAGCGTACGCGGCTTATTCTCTCGTTGGTCGTCGCGAGCGGGC
GCGGATTCCGCTCCTCGCCTATGCGATCGCTGTGTACGGATCAGCTGCAGTGTGGGTCTTCCCTTTTGCGCTCCTGGCAG
CGCTCAGCGCGGGAGCGAGCGTCGCTCGTTATGACTGGCAGGTGGTTGCGGCGCTCCTCGGGCTCGGGTTGATACCGAAC
ACGCTCGGTCACACGCTGTACAACGCGAGTGTCCGCCGATTGAACGCTGCGATCGCTAACGTCATCTACACGCAAGAGAT
GACCGGGGCGATTCTCCTGGCCTGGCTGATCCTCGGCGAGGTGCCGGGTGTGAATGCAGTCGTGGGGGCGATCATCATGC
TGGTTGGGATTCTCTTCGTACTGCTTCCTTAG

Upstream 100 bases:

>100_bases
GAACAGTTAGATCGTTCATGTGGTCGAACCTCTGCCGCGGGGTTCGGCGCCCAGAACAGGCGCTGTATCCTACCACTCAT
GGACCCTCGAGAGGAAGAGG

Downstream 100 bases:

>100_bases
GATTCTGCAGCGAAAATGGCCGCGGCGATAGATGGATCGTACAGTTCGACCGTTACCTCCGAGCCAACCGGGGCTTCCGA
CCACTCTTCGGGAATCACTG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MMAEGQYVLRVESSRNDFVIGLGFAVAGVLAVSTSAVLIRLAGSVSAFEIAFWRLLVATLALVPVALATRTLGAVRSLGW
PRLAIYGATLAVHFVAYNAALQFAPVAHVLPLLYTSTIMLAILSAFLLKESLRPRQIAGIVIVLSGVVVLTGFEPRFGLR
IAIGDGLALLSAAAYAAYSLVGRRERARIPLLAYAIAVYGSAAVWVFPFALLAALSAGASVARYDWQVVAALLGLGLIPN
TLGHTLYNASVRRLNAAIANVIYTQEMTGAILLAWLILGEVPGVNAVVGAIIMLVGILFVLLP

Sequences:

>Translated_303_residues
MMAEGQYVLRVESSRNDFVIGLGFAVAGVLAVSTSAVLIRLAGSVSAFEIAFWRLLVATLALVPVALATRTLGAVRSLGW
PRLAIYGATLAVHFVAYNAALQFAPVAHVLPLLYTSTIMLAILSAFLLKESLRPRQIAGIVIVLSGVVVLTGFEPRFGLR
IAIGDGLALLSAAAYAAYSLVGRRERARIPLLAYAIAVYGSAAVWVFPFALLAALSAGASVARYDWQVVAALLGLGLIPN
TLGHTLYNASVRRLNAAIANVIYTQEMTGAILLAWLILGEVPGVNAVVGAIIMLVGILFVLLP
>Mature_303_residues
MMAEGQYVLRVESSRNDFVIGLGFAVAGVLAVSTSAVLIRLAGSVSAFEIAFWRLLVATLALVPVALATRTLGAVRSLGW
PRLAIYGATLAVHFVAYNAALQFAPVAHVLPLLYTSTIMLAILSAFLLKESLRPRQIAGIVIVLSGVVVLTGFEPRFGLR
IAIGDGLALLSAAAYAAYSLVGRRERARIPLLAYAIAVYGSAAVWVFPFALLAALSAGASVARYDWQVVAALLGLGLIPN
TLGHTLYNASVRRLNAAIANVIYTQEMTGAILLAWLILGEVPGVNAVVGAIIMLVGILFVLLP

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31894; Mature: 31894

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAEGQYVLRVESSRNDFVIGLGFAVAGVLAVSTSAVLIRLAGSVSAFEIAFWRLLVATL
CCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ALVPVALATRTLGAVRSLGWPRLAIYGATLAVHFVAYNAALQFAPVAHVLPLLYTSTIML
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILSAFLLKESLRPRQIAGIVIVLSGVVVLTGFEPRFGLRIAIGDGLALLSAAAYAAYSL
HHHHHHHHHHCCCCHHHHHHHHHHHCHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHH
VGRRERARIPLLAYAIAVYGSAAVWVFPFALLAALSAGASVARYDWQVVAALLGLGLIPN
HCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH
TLGHTLYNASVRRLNAAIANVIYTQEMTGAILLAWLILGEVPGVNAVVGAIIMLVGILFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLP
HCC
>Mature Secondary Structure
MMAEGQYVLRVESSRNDFVIGLGFAVAGVLAVSTSAVLIRLAGSVSAFEIAFWRLLVATL
CCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ALVPVALATRTLGAVRSLGWPRLAIYGATLAVHFVAYNAALQFAPVAHVLPLLYTSTIML
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILSAFLLKESLRPRQIAGIVIVLSGVVVLTGFEPRFGLRIAIGDGLALLSAAAYAAYSL
HHHHHHHHHHCCCCHHHHHHHHHHHCHHEEECCCCCCEEEEEECCCHHHHHHHHHHHHHH
VGRRERARIPLLAYAIAVYGSAAVWVFPFALLAALSAGASVARYDWQVVAALLGLGLIPN
HCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH
TLGHTLYNASVRRLNAAIANVIYTQEMTGAILLAWLILGEVPGVNAVVGAIIMLVGILFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLP
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA