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The map label for this gene is abgB [H]

Identifier: 221632879

GI number: 221632879

Start: 859680

End: 861296

Strand: Reverse

Name: abgB [H]

Synonym: trd_0879

Alternate gene names: 221632879

Gene position: 861296-859680 (Counterclockwise)

Preceding gene: 221632880

Following gene: 221632878

Centisome position: 43.0

GC content: 60.3

Gene sequence:

>1617_bases
ATGGCGGCATCACTCACGGAAGCCAAGCGCACGGCATTCCGCTGGATCGACGACAATGCGCCGTGGCTGTCGGCCTTCGA
TCTGGAAATCTGGCGCTATGCTGAACCGGCATGGCGAGAATACAAGTCGGCTCGCGCATATGTGGATCTTCTCCAGAGGC
ATGGCTTTGCCGTCGAGGTCGGATCGGGTGGTATGCCGACCGCTTTCGTCGCGAGCTGGGGTGAGGGACGCCCGATCCTG
GGAGCCTATGCTGAATACGATGCGGTACCTGGCAATTCACAAGAACCGGTTCCGTACCGGAAGCCGCGCGAGGGCTTGCA
TCCGTGGGCTGCGGGTCACACGGATCCACATTCTATGCTCGGCGTAGCCGCACTCACCGGCGTCTTGGCCGCACGCTACG
CGATGGAGCGACATAGGCTCAAAGGAACGCTTCGCTTCTTCGGCGAGCCAGCCGAGAAGGTTTGCGGCTCCAAACCGATC
CATGCTGCGAAGGGGTACTATGACGGCTTCGATGCGTTCATCGCCTATCACCCGTCGTATTACCCCAAGGGCACCAATAC
GGTCGCCTGGGAAACGCACTGCGGCTCGTACTGGAGCTGCGTTTTCTCCTTCGAGTGTGTGGAGCCAGAACGCTGGATCG
ACCGGAGCTTGTTTCCAGACGTCGGTGGAGCCCACGCAGCAGCGCGGTGCCCGGGAGCCATCGACGCACTCTGCCTGATG
TACACGATGACCAAATACACTAAAGAGGCGATGTTTCCGCATACCGGTTCCTGGACGTTGAACGAGTTCATCTTGGTCGC
GGGAGACGCGACCGCAGACAATCTCCCACCTCGGTTAGCCCAGATCCAATATGCGTGGCGCTCACCGAGCCTGGGAATCC
AAGAACAGATCTACCGTGTGCTCGCCAATAATGCCAGGCGCGCGGCTCAGGCGACGGGTTGTCGCGTATCGGTACGCTGG
GTCAGCAAGACACGTGTCGGACTGCCGAATTTAACTCTTGCGCGATTGACATACGATAACTTGGAATTGGTTGGTCCTCC
TCGTTATAGTGAGGAAGCGCGTGCGTTCGCGCGAGAGATTCAGCGGAATCTGGGCCTCGAGCCGATGGCGGATCCGTTCA
TCGAGGATGTCGAGCGAGTGATTCCTCCCCAAGAGTACGAAGCTCGCCTGCGATCAGCCTTGCCGGAATGGCAGCGGAAC
TTTACCTCTGATGATTATGTGGAGTACACCTGGCATGCTCCGACGGTGCGCTTGTACACGGCTCGACCGCGTTTGCGCCC
GCCGTCGCCCGATTACGCCTACCCAGCCTGGGCTGACAACGCGCTGGGTGGGCGTCCTGAGATCGTCGATCCAGGCATGT
TCGTGGCCGGCAAGGTCGTCGCGGCAACACTGCTGGATCTGGTGACCTACCCCGAGTTACTGGAACGTGCCTGGAACGAA
TTCCGCGAACGCACCGGGGGCGGCGTTGGTGGCAGCCAGTGGGTGGCACCCCTCTTGCCGCGCGATTTCCCACCCCCGAT
CGATTTGCGCTGGCCGGAGTACATCACGACAGTTCGCGGTGAAGAATGGTGGATTCCCACGCCGAACCAAGCTGCTTTCA
GCGAACTCGAGGACTGA

Upstream 100 bases:

>100_bases
GCTGCGCGAGGCCGCGATCTTCCAGTACACGCACTACTACGAGCCACTCGGAGAGTGATGGTAACGCGGGGCCGGGGGAA
CTCCCGGACGGAGGGGCGCG

Downstream 100 bases:

>100_bases
TCGTGGCATACTGTGTGCGGGTCGTTGACGCGTGAGGAAGGAGGATTGCGGTGAGTCGAGATTGGGAGCGACTACTCAAG
GACCTCGAGCGGGCCAGTCG

Product: Peptidase family M20/M25/M40

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MAASLTEAKRTAFRWIDDNAPWLSAFDLEIWRYAEPAWREYKSARAYVDLLQRHGFAVEVGSGGMPTAFVASWGEGRPIL
GAYAEYDAVPGNSQEPVPYRKPREGLHPWAAGHTDPHSMLGVAALTGVLAARYAMERHRLKGTLRFFGEPAEKVCGSKPI
HAAKGYYDGFDAFIAYHPSYYPKGTNTVAWETHCGSYWSCVFSFECVEPERWIDRSLFPDVGGAHAAARCPGAIDALCLM
YTMTKYTKEAMFPHTGSWTLNEFILVAGDATADNLPPRLAQIQYAWRSPSLGIQEQIYRVLANNARRAAQATGCRVSVRW
VSKTRVGLPNLTLARLTYDNLELVGPPRYSEEARAFAREIQRNLGLEPMADPFIEDVERVIPPQEYEARLRSALPEWQRN
FTSDDYVEYTWHAPTVRLYTARPRLRPPSPDYAYPAWADNALGGRPEIVDPGMFVAGKVVAATLLDLVTYPELLERAWNE
FRERTGGGVGGSQWVAPLLPRDFPPPIDLRWPEYITTVRGEEWWIPTPNQAAFSELED

Sequences:

>Translated_538_residues
MAASLTEAKRTAFRWIDDNAPWLSAFDLEIWRYAEPAWREYKSARAYVDLLQRHGFAVEVGSGGMPTAFVASWGEGRPIL
GAYAEYDAVPGNSQEPVPYRKPREGLHPWAAGHTDPHSMLGVAALTGVLAARYAMERHRLKGTLRFFGEPAEKVCGSKPI
HAAKGYYDGFDAFIAYHPSYYPKGTNTVAWETHCGSYWSCVFSFECVEPERWIDRSLFPDVGGAHAAARCPGAIDALCLM
YTMTKYTKEAMFPHTGSWTLNEFILVAGDATADNLPPRLAQIQYAWRSPSLGIQEQIYRVLANNARRAAQATGCRVSVRW
VSKTRVGLPNLTLARLTYDNLELVGPPRYSEEARAFAREIQRNLGLEPMADPFIEDVERVIPPQEYEARLRSALPEWQRN
FTSDDYVEYTWHAPTVRLYTARPRLRPPSPDYAYPAWADNALGGRPEIVDPGMFVAGKVVAATLLDLVTYPELLERAWNE
FRERTGGGVGGSQWVAPLLPRDFPPPIDLRWPEYITTVRGEEWWIPTPNQAAFSELED
>Mature_537_residues
AASLTEAKRTAFRWIDDNAPWLSAFDLEIWRYAEPAWREYKSARAYVDLLQRHGFAVEVGSGGMPTAFVASWGEGRPILG
AYAEYDAVPGNSQEPVPYRKPREGLHPWAAGHTDPHSMLGVAALTGVLAARYAMERHRLKGTLRFFGEPAEKVCGSKPIH
AAKGYYDGFDAFIAYHPSYYPKGTNTVAWETHCGSYWSCVFSFECVEPERWIDRSLFPDVGGAHAAARCPGAIDALCLMY
TMTKYTKEAMFPHTGSWTLNEFILVAGDATADNLPPRLAQIQYAWRSPSLGIQEQIYRVLANNARRAAQATGCRVSVRWV
SKTRVGLPNLTLARLTYDNLELVGPPRYSEEARAFAREIQRNLGLEPMADPFIEDVERVIPPQEYEARLRSALPEWQRNF
TSDDYVEYTWHAPTVRLYTARPRLRPPSPDYAYPAWADNALGGRPEIVDPGMFVAGKVVAATLLDLVTYPELLERAWNEF
RERTGGGVGGSQWVAPLLPRDFPPPIDLRWPEYITTVRGEEWWIPTPNQAAFSELED

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787598, Length=492, Percent_Identity=26.8292682926829, Blast_Score=136, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 60571; Mature: 60440

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASLTEAKRTAFRWIDDNAPWLSAFDLEIWRYAEPAWREYKSARAYVDLLQRHGFAVEV
CCCCHHHHHHHHHHEECCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEE
GSGGMPTAFVASWGEGRPILGAYAEYDAVPGNSQEPVPYRKPREGLHPWAAGHTDPHSML
CCCCCCHHHHCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GVAALTGVLAARYAMERHRLKGTLRFFGEPAEKVCGSKPIHAAKGYYDGFDAFIAYHPSY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCHHHHEEECCCC
YPKGTNTVAWETHCGSYWSCVFSFECVEPERWIDRSLFPDVGGAHAAARCPGAIDALCLM
CCCCCCEEEEECCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH
YTMTKYTKEAMFPHTGSWTLNEFILVAGDATADNLPPRLAQIQYAWRSPSLGIQEQIYRV
HHHHHHHHHHCCCCCCCCEECEEEEEECCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHH
LANNARRAAQATGCRVSVRWVSKTRVGLPNLTLARLTYDNLELVGPPRYSEEARAFAREI
HHHHHHHHHHHCCCEEEEEEECHHCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHH
QRNLGLEPMADPFIEDVERVIPPQEYEARLRSALPEWQRNFTSDDYVEYTWHAPTVRLYT
HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCEEEEEE
ARPRLRPPSPDYAYPAWADNALGGRPEIVDPGMFVAGKVVAATLLDLVTYPELLERAWNE
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRERTGGGVGGSQWVAPLLPRDFPPPIDLRWPEYITTVRGEEWWIPTPNQAAFSELED
HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCC
>Mature Secondary Structure 
AASLTEAKRTAFRWIDDNAPWLSAFDLEIWRYAEPAWREYKSARAYVDLLQRHGFAVEV
CCCHHHHHHHHHHEECCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEE
GSGGMPTAFVASWGEGRPILGAYAEYDAVPGNSQEPVPYRKPREGLHPWAAGHTDPHSML
CCCCCCHHHHCCCCCCCCCEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GVAALTGVLAARYAMERHRLKGTLRFFGEPAEKVCGSKPIHAAKGYYDGFDAFIAYHPSY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCHHHHEEECCCC
YPKGTNTVAWETHCGSYWSCVFSFECVEPERWIDRSLFPDVGGAHAAARCPGAIDALCLM
CCCCCCEEEEECCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH
YTMTKYTKEAMFPHTGSWTLNEFILVAGDATADNLPPRLAQIQYAWRSPSLGIQEQIYRV
HHHHHHHHHHCCCCCCCCEECEEEEEECCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHH
LANNARRAAQATGCRVSVRWVSKTRVGLPNLTLARLTYDNLELVGPPRYSEEARAFAREI
HHHHHHHHHHHCCCEEEEEEECHHCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHH
QRNLGLEPMADPFIEDVERVIPPQEYEARLRSALPEWQRNFTSDDYVEYTWHAPTVRLYT
HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCEEEEEE
ARPRLRPPSPDYAYPAWADNALGGRPEIVDPGMFVAGKVVAATLLDLVTYPELLERAWNE
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRERTGGGVGGSQWVAPLLPRDFPPPIDLRWPEYITTVRGEEWWIPTPNQAAFSELED
HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]