Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632871

Identifier: 221632871

GI number: 221632871

Start: 848921

End: 850093

Strand: Reverse

Name: 221632871

Synonym: trd_0869

Alternate gene names: NA

Gene position: 850093-848921 (Counterclockwise)

Preceding gene: 221632872

Following gene: 221632870

Centisome position: 42.44

GC content: 59.76

Gene sequence:

>1173_bases
ATGAACCAGCGTTCAGCACAGGCTCTGGGGCTTGTGGTGGGACTCTCGGTCGGGCGATGGATCGGACAGCAGACGCGTGA
CCGCTTGATGGTTCTCGAACCTCCTCGGCTCGTCGACTGGGAGCGGGCGCGGGAGATCGCGTTACGTCTCTCCGGTGGAG
TGCGCTTGAGTCCATTGGAGCGAGAGGAGGCAACGGATCGCTATCGCAGACTCGTCACGGAACTCGCGCCGGCCATCGCT
GACTTTGTTGGTTCACCGGTTCCCAGCGGCATACATCGCGTCTATGCCTTCGATCGGATCGATTGGATCGATGCGAATCT
GGAAGGATTTGCAGAGGTTCTGCGTCCGCTGGAGGTCGTCATCCAACTACCGGAACAACCGCTCGCTCGGGCTGCTGCGG
TCCTCTGGGCGCACGCTGGCCGGTCCGCTGCGACGATGGAAGTGGGGATGGCACTTGGGTTCCTCTCGCGGCGAGTTTTG
GGCCAGTACGACATTGCTGTACTCGGTGGGGAACCGACTGCGGCTGGAAAACTCTATTTCGTCGAGCCGAACATTCGCTG
GTTGATCAGGAACTGGCGACTGCCCGAGCACGACTTTTATCGTTGGCTGGTCTTGCACGAGGTAACCCATGCCTTCGAGT
TCGAAAGCAGTCCTTGGTTGCGCGATCATGTCAATGGGCTCTTGCGCCAGTGGGTCGAAGCGCTGCGACATGAGGGGAAG
CTCTTTCATCGCGTCATCGAGATTCTGCGGACCGCTCGGCGAGGGGACTGGACCGCCGATACGACGTGGATGGAACTGCT
CATGTCTACCGAGCAGCGACGTCTGTTCCGGCAGTTGCAGGCGATCATGGCTGTCATCGAAGGGTACAGCAACTATGTCA
TGCGCGAAGTCGGTCGAGAAATCGTTGAATCCTACCCACTGATCGAGCGTCGTTTCGAGGAGCGTGAGCGTGCTCGCACA
CCAGCGGAGCGTTTGCTACTGCGCCTGACCGGGTTGGACATGAAACTCGAGCAGTATCGGCGTGGTGAGGGGTTCTGCCG
AGCGATCGCTGATCGCATGGGACGCGAGGCCTTCGCTGTTTTGTGGAGAGGCCCAGAGTGGTTGCCGACGTACGAGGAAC
TCGCTGAACCGGATAGCTGGATCAGTCGCGTGACGAGTGGTTCGTCAGAATGA

Upstream 100 bases:

>100_bases
ACGGAGACTCCGGAAGAGGGAACTCCGCAACCCACAGAGGCCACGACCCCGGTACCGGAGGCGACGCCGACGCCGGTGCC
GTAGTGCGAGGAGTGCGATC

Downstream 100 bases:

>100_bases
CGCTCGATATCCTCAAGGTCGCTGGTGAGCTTCGGGCAGCAGTAGAGACGGTAATCGAAAAGGAGCGCAGTGGACGCCCT
GCGCTTCTCGAACTCTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MNQRSAQALGLVVGLSVGRWIGQQTRDRLMVLEPPRLVDWERAREIALRLSGGVRLSPLEREEATDRYRRLVTELAPAIA
DFVGSPVPSGIHRVYAFDRIDWIDANLEGFAEVLRPLEVVIQLPEQPLARAAAVLWAHAGRSAATMEVGMALGFLSRRVL
GQYDIAVLGGEPTAAGKLYFVEPNIRWLIRNWRLPEHDFYRWLVLHEVTHAFEFESSPWLRDHVNGLLRQWVEALRHEGK
LFHRVIEILRTARRGDWTADTTWMELLMSTEQRRLFRQLQAIMAVIEGYSNYVMREVGREIVESYPLIERRFEERERART
PAERLLLRLTGLDMKLEQYRRGEGFCRAIADRMGREAFAVLWRGPEWLPTYEELAEPDSWISRVTSGSSE

Sequences:

>Translated_390_residues
MNQRSAQALGLVVGLSVGRWIGQQTRDRLMVLEPPRLVDWERAREIALRLSGGVRLSPLEREEATDRYRRLVTELAPAIA
DFVGSPVPSGIHRVYAFDRIDWIDANLEGFAEVLRPLEVVIQLPEQPLARAAAVLWAHAGRSAATMEVGMALGFLSRRVL
GQYDIAVLGGEPTAAGKLYFVEPNIRWLIRNWRLPEHDFYRWLVLHEVTHAFEFESSPWLRDHVNGLLRQWVEALRHEGK
LFHRVIEILRTARRGDWTADTTWMELLMSTEQRRLFRQLQAIMAVIEGYSNYVMREVGREIVESYPLIERRFEERERART
PAERLLLRLTGLDMKLEQYRRGEGFCRAIADRMGREAFAVLWRGPEWLPTYEELAEPDSWISRVTSGSSE
>Mature_390_residues
MNQRSAQALGLVVGLSVGRWIGQQTRDRLMVLEPPRLVDWERAREIALRLSGGVRLSPLEREEATDRYRRLVTELAPAIA
DFVGSPVPSGIHRVYAFDRIDWIDANLEGFAEVLRPLEVVIQLPEQPLARAAAVLWAHAGRSAATMEVGMALGFLSRRVL
GQYDIAVLGGEPTAAGKLYFVEPNIRWLIRNWRLPEHDFYRWLVLHEVTHAFEFESSPWLRDHVNGLLRQWVEALRHEGK
LFHRVIEILRTARRGDWTADTTWMELLMSTEQRRLFRQLQAIMAVIEGYSNYVMREVGREIVESYPLIERRFEERERART
PAERLLLRLTGLDMKLEQYRRGEGFCRAIADRMGREAFAVLWRGPEWLPTYEELAEPDSWISRVTSGSSE

Specific function: Unknown

COG id: COG5282

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45151; Mature: 45151

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRSAQALGLVVGLSVGRWIGQQTRDRLMVLEPPRLVDWERAREIALRLSGGVRLSPLE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCEECCCC
REEATDRYRRLVTELAPAIADFVGSPVPSGIHRVYAFDRIDWIDANLEGFAEVLRPLEVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH
IQLPEQPLARAAAVLWAHAGRSAATMEVGMALGFLSRRVLGQYDIAVLGGEPTAAGKLYF
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE
VEPNIRWLIRNWRLPEHDFYRWLVLHEVTHAFEFESSPWLRDHVNGLLRQWVEALRHEGK
ECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFHRVIEILRTARRGDWTADTTWMELLMSTEQRRLFRQLQAIMAVIEGYSNYVMREVGRE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVESYPLIERRFEERERARTPAERLLLRLTGLDMKLEQYRRGEGFCRAIADRMGREAFAV
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCHHHHHH
LWRGPEWLPTYEELAEPDSWISRVTSGSSE
HCCCCCCCCCHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNQRSAQALGLVVGLSVGRWIGQQTRDRLMVLEPPRLVDWERAREIALRLSGGVRLSPLE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCEECCCC
REEATDRYRRLVTELAPAIADFVGSPVPSGIHRVYAFDRIDWIDANLEGFAEVLRPLEVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHH
IQLPEQPLARAAAVLWAHAGRSAATMEVGMALGFLSRRVLGQYDIAVLGGEPTAAGKLYF
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE
VEPNIRWLIRNWRLPEHDFYRWLVLHEVTHAFEFESSPWLRDHVNGLLRQWVEALRHEGK
ECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFHRVIEILRTARRGDWTADTTWMELLMSTEQRRLFRQLQAIMAVIEGYSNYVMREVGRE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVESYPLIERRFEERERARTPAERLLLRLTGLDMKLEQYRRGEGFCRAIADRMGREAFAV
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCHHHHHH
LWRGPEWLPTYEELAEPDSWISRVTSGSSE
HCCCCCCCCCHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA