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The map label for this gene is 221632823

Identifier: 221632823

GI number: 221632823

Start: 796047

End: 796586

Strand: Reverse

Name: 221632823

Synonym: trd_0817

Alternate gene names: NA

Gene position: 796586-796047 (Counterclockwise)

Preceding gene: 221632824

Following gene: 221632816

Centisome position: 39.77

GC content: 58.15

Gene sequence:

>540_bases
GTGGATGCTCAGAGTTTGAATTATCAGCGGGTGATCGATGACGCGTTGAAGATTCTCTACTCGCATCACTACCGGTTGAT
GTCGCGCTTGCTCCCTCGTGTCATCGAGCAGATCAATCTGAGCGAAAAGGAACTCCTCGAAGAGCTCCGAGCGAGCCCGA
TCGGACAGGTGCTGCAGCGCCTCGCTGCCATTGCGCAAGGCAGGCTGATCGAGCAACGGGAACGGATTCTGGAAAACATC
GAACTGGTCCTCCAACTCCTCTTTTGGGCACCCGGCGCAGAAGACTACTCTGTTCCACGTGCCTTCTGGGAAAGTGAACT
CGGGAGACTGCTCTCGCAGGCGAAATTCCGAGCCTACGAGCCCAACGAGCTTGTCAGCATCACCCAGGCAGCCCATCGTC
TCGGTGTCACACGTCCGACCATCTACCGCTGGATGGACGAGCGCAAGCTGGAGTATGTCCGCGACGAGCACTCCGGCCGC
ACGTTCATCATCCGCCGAGACGTGGAAGCCTTACGCCAGCAACTCCAGGAATCGGCCTGA

Upstream 100 bases:

>100_bases
CGAGCGAGCTGGACTTTTTTGCTCTATTGACGGTCAGCTTCGGACTCCGTACAATGGGTACGTACACTGGTCGTCCGATT
GCTCGGCGGGAGGAGAACCC

Downstream 100 bases:

>100_bases
TCGACGACGATCGGTCGATACAGTCGAGCGGTTTGAGCCGTCCTCCTCCGGCTAAGAGCGGCTAGCCAGGAGCGTTGGGA
GTTCACCGCGTTCTTCGAGT

Product: excisionase family DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MDAQSLNYQRVIDDALKILYSHHYRLMSRLLPRVIEQINLSEKELLEELRASPIGQVLQRLAAIAQGRLIEQRERILENI
ELVLQLLFWAPGAEDYSVPRAFWESELGRLLSQAKFRAYEPNELVSITQAAHRLGVTRPTIYRWMDERKLEYVRDEHSGR
TFIIRRDVEALRQQLQESA

Sequences:

>Translated_179_residues
MDAQSLNYQRVIDDALKILYSHHYRLMSRLLPRVIEQINLSEKELLEELRASPIGQVLQRLAAIAQGRLIEQRERILENI
ELVLQLLFWAPGAEDYSVPRAFWESELGRLLSQAKFRAYEPNELVSITQAAHRLGVTRPTIYRWMDERKLEYVRDEHSGR
TFIIRRDVEALRQQLQESA
>Mature_179_residues
MDAQSLNYQRVIDDALKILYSHHYRLMSRLLPRVIEQINLSEKELLEELRASPIGQVLQRLAAIAQGRLIEQRERILENI
ELVLQLLFWAPGAEDYSVPRAFWESELGRLLSQAKFRAYEPNELVSITQAAHRLGVTRPTIYRWMDERKLEYVRDEHSGR
TFIIRRDVEALRQQLQESA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21083; Mature: 21083

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAQSLNYQRVIDDALKILYSHHYRLMSRLLPRVIEQINLSEKELLEELRASPIGQVLQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
LAAIAQGRLIEQRERILENIELVLQLLFWAPGAEDYSVPRAFWESELGRLLSQAKFRAYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PNELVSITQAAHRLGVTRPTIYRWMDERKLEYVRDEHSGRTFIIRRDVEALRQQLQESA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAQSLNYQRVIDDALKILYSHHYRLMSRLLPRVIEQINLSEKELLEELRASPIGQVLQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
LAAIAQGRLIEQRERILENIELVLQLLFWAPGAEDYSVPRAFWESELGRLLSQAKFRAYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PNELVSITQAAHRLGVTRPTIYRWMDERKLEYVRDEHSGRTFIIRRDVEALRQQLQESA
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA