Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632816

Identifier: 221632816

GI number: 221632816

Start: 789765

End: 790439

Strand: Reverse

Name: 221632816

Synonym: trd_0810

Alternate gene names: NA

Gene position: 790439-789765 (Counterclockwise)

Preceding gene: 221632823

Following gene: 221632814

Centisome position: 39.46

GC content: 62.96

Gene sequence:

>675_bases
ATGCCTGAGTCATCGCATCGTCGTTTGCGGCTGATCCCACGCGGCCAGGACGTGCAACAGTCGGTACTGGAACTCTTCTA
TGGTCCGCTCGCTCCTGTCTATCCGCTATTGACACGGATGCTCTTCGGAAACGCCTGGCAAGCCTGGCAACGCAACGCGT
TACCCTGGCTTGCCGGTGCGCGAGTCGTTGCTGAGATCGGTTGTGGGCCAGGTGACTTCGCCACGGACCTCGCCGCCCAA
GGCAAGCGAGTCCTGGCGATCGATCGTTCGCCGACGATGATACGGCTGGCTCGCCGCCGCGTCGCACGCTTTCAGCGGGT
GTGGATCGTCCGCGCTGATGCTCAGCGACTACCATTGCGGGATGCTTGCCTCGATGCGGTCGTGACCACCTTTCCGACCG
AAGTCTTTCTGACCTACGAGATGACCAGTGAAGTGGCTCGGGTTCTCCGTCCGGGAGGCCTGTACGTTGCGGTCGTCGCT
GCCCAGCCGCGCTCGTGGCCGTGGTGGATACGCCCTTTCCGCCGTCTTCTCGGTCCGGTTGCTAACCATCCTCCGCTCGA
CTGTAGGCGACTTCCCGCGCCACCACCCGTCCCGCTCTTCGCCGAGATGCGTTGGGAAACACAGCAGGATGCCACTGGTC
GCGTCTGTCTGTGGATCGCTCGGCGAGGTGATTAG

Upstream 100 bases:

>100_bases
GATCCCTTCGATGAGAGGTGTCGCTCCGTTTGTCTCTCGATTCGGTATACCCTGTCGATCGAGAATCGCACAAGGTTGAC
GAGGAGGACGTACGAGCAGC

Downstream 100 bases:

>100_bases
CGTGCGAGAAAACTCACGTTTCCCACGGTCCGGTCGATATTGATGGTTTCGACTCAGTGAGCAGCTCGTCGACGTCGACC
AGATCCGCGAGCGGGTCGTC

Product: putative ubiE/COQ5 methyltransferase family protein

Products: NA

Alternate protein names: UbiE/COQ5 Methyltransferase Family Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MPESSHRRLRLIPRGQDVQQSVLELFYGPLAPVYPLLTRMLFGNAWQAWQRNALPWLAGARVVAEIGCGPGDFATDLAAQ
GKRVLAIDRSPTMIRLARRRVARFQRVWIVRADAQRLPLRDACLDAVVTTFPTEVFLTYEMTSEVARVLRPGGLYVAVVA
AQPRSWPWWIRPFRRLLGPVANHPPLDCRRLPAPPPVPLFAEMRWETQQDATGRVCLWIARRGD

Sequences:

>Translated_224_residues
MPESSHRRLRLIPRGQDVQQSVLELFYGPLAPVYPLLTRMLFGNAWQAWQRNALPWLAGARVVAEIGCGPGDFATDLAAQ
GKRVLAIDRSPTMIRLARRRVARFQRVWIVRADAQRLPLRDACLDAVVTTFPTEVFLTYEMTSEVARVLRPGGLYVAVVA
AQPRSWPWWIRPFRRLLGPVANHPPLDCRRLPAPPPVPLFAEMRWETQQDATGRVCLWIARRGD
>Mature_223_residues
PESSHRRLRLIPRGQDVQQSVLELFYGPLAPVYPLLTRMLFGNAWQAWQRNALPWLAGARVVAEIGCGPGDFATDLAAQG
KRVLAIDRSPTMIRLARRRVARFQRVWIVRADAQRLPLRDACLDAVVTTFPTEVFLTYEMTSEVARVLRPGGLYVAVVAA
QPRSWPWWIRPFRRLLGPVANHPPLDCRRLPAPPPVPLFAEMRWETQQDATGRVCLWIARRGD

Specific function: Unknown

COG id: COG2226

COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25480; Mature: 25349

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESSHRRLRLIPRGQDVQQSVLELFYGPLAPVYPLLTRMLFGNAWQAWQRNALPWLAGA
CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHH
RVVAEIGCGPGDFATDLAAQGKRVLAIDRSPTMIRLARRRVARFQRVWIVRADAQRLPLR
HHHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHH
DACLDAVVTTFPTEVFLTYEMTSEVARVLRPGGLYVAVVAAQPRSWPWWIRPFRRLLGPV
HHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
ANHPPLDCRRLPAPPPVPLFAEMRWETQQDATGRVCLWIARRGD
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
PESSHRRLRLIPRGQDVQQSVLELFYGPLAPVYPLLTRMLFGNAWQAWQRNALPWLAGA
CCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHH
RVVAEIGCGPGDFATDLAAQGKRVLAIDRSPTMIRLARRRVARFQRVWIVRADAQRLPLR
HHHHHHCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHH
DACLDAVVTTFPTEVFLTYEMTSEVARVLRPGGLYVAVVAAQPRSWPWWIRPFRRLLGPV
HHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
ANHPPLDCRRLPAPPPVPLFAEMRWETQQDATGRVCLWIARRGD
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA