Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221632768

Identifier: 221632768

GI number: 221632768

Start: 750630

End: 750764

Strand: Reverse

Name: 221632768

Synonym: trd_0759

Alternate gene names: NA

Gene position: 750764-750630 (Counterclockwise)

Preceding gene: 221632771

Following gene: 221632767

Centisome position: 37.48

GC content: 59.26

Gene sequence:

>135_bases
ATGCGCACCGTTAACCCGGGATCGCGTGCCCAGCGTTCCACGCGTCGCATCGAATACACCATCGTTCGCCTCCCGAGTGC
TTTTCCGATCCGCGATTATACTGCCGAGAAGATGCCATACCCGGACGCGTTCTGA

Upstream 100 bases:

>100_bases
CACGGCGATGACGAGCACCGTCGCCGTATCCACCCCGCTCCAAATCAGCGCGGAAAGAAAGAACAGATAGAGCAAGGCCA
AACCGGCGAGCACGATCATC

Downstream 100 bases:

>100_bases
GGAGGCACATCGGACAGTGGTAGCACCACGATTGCTCTTTCCGCGTCGAATGTTCGCGCATCGCCGGCGAGTACTCGAGA
TCGCCGGCGTCTTCTCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MRTVNPGSRAQRSTRRIEYTIVRLPSAFPIRDYTAEKMPYPDAF

Sequences:

>Translated_44_residues
MRTVNPGSRAQRSTRRIEYTIVRLPSAFPIRDYTAEKMPYPDAF
>Mature_44_residues
MRTVNPGSRAQRSTRRIEYTIVRLPSAFPIRDYTAEKMPYPDAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5160; Mature: 5160

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVNPGSRAQRSTRRIEYTIVRLPSAFPIRDYTAEKMPYPDAF
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTVNPGSRAQRSTRRIEYTIVRLPSAFPIRDYTAEKMPYPDAF
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA