Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is ycaR [C]

Identifier: 221632731

GI number: 221632731

Start: 713824

End: 714015

Strand: Reverse

Name: ycaR [C]

Synonym: trd_0719

Alternate gene names: 221632731

Gene position: 714015-713824 (Counterclockwise)

Preceding gene: 221632732

Following gene: 221632730

Centisome position: 35.65

GC content: 58.33

Gene sequence:

>192_bases
ATGGCTGAGACGCAACCGATCATCGACCCGGAACTTCTCGAGATCCTGGCCTGCCCAGCCTGTCACGGTGAACTCGTTCT
CGCGAATGACCGTTTGATCTGTCGTACCTGCCAGCGCCGCTATCCGATCGAAGACGGCATCCCCATCCTTCTCGTCGAGG
AAGCGGAGTTGCCAGAGAAACCTGGCACTTGA

Upstream 100 bases:

>100_bases
GGTTCACGAAATCCCTTTCACGTCCTGTTTGCGTTCCGCCAGCTCCTTCCGCCCGCAGCCTGGTAAGATGCACGTCAGCG
ACACGAATGGAGCCGAGCGC

Downstream 100 bases:

>100_bases
GACGAACTCCTGTTCTTCTCTCTGGTATCCTCATACGTGTAGGGATGAGCGATGAACGAGCCACGCATCGTCGCACCACA
ACCGACCACGAGCGAGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MAETQPIIDPELLEILACPACHGELVLANDRLICRTCQRRYPIEDGIPILLVEEAELPEKPGT

Sequences:

>Translated_63_residues
MAETQPIIDPELLEILACPACHGELVLANDRLICRTCQRRYPIEDGIPILLVEEAELPEKPGT
>Mature_62_residues
AETQPIIDPELLEILACPACHGELVLANDRLICRTCQRRYPIEDGIPILLVEEAELPEKPGT

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7011; Mature: 6880

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETQPIIDPELLEILACPACHGELVLANDRLICRTCQRRYPIEDGIPILLVEEAELPEK
CCCCCCCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCC
PGT
CCC
>Mature Secondary Structure 
AETQPIIDPELLEILACPACHGELVLANDRLICRTCQRRYPIEDGIPILLVEEAELPEK
CCCCCCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCC
PGT
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA