Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632681

Identifier: 221632681

GI number: 221632681

Start: 659396

End: 660109

Strand: Reverse

Name: 221632681

Synonym: trd_0664

Alternate gene names: NA

Gene position: 660109-659396 (Counterclockwise)

Preceding gene: 221632682

Following gene: 221632680

Centisome position: 32.96

GC content: 63.31

Gene sequence:

>714_bases
GTGGAAATCGCTCGTGCGTTGAGCGCTCCGTTTCGCGACGATGACTGGCCAGAGAAGCTGGTGATCGCAGCCCTGCTTCT
CCTGCTCCCGCTCATCGGTCCGCTTTTGGTGCTCGGCTGGGCCTTGCACTACGCCCGCGAAGTCGCCGAGCAGCGCGATC
GAGTCCTCCCCCACTGGCAGAACTGGAGCGAGCACCTGACGCTCGGTCTCTTGGGCGCTGTCGCGACCGTCGTCTGGTTT
CTCCCGACCCTCGCGGTACTCGCCCTCAGCGCTCTCACTCTGTTCCCCGCCTTGCTCGGTGACGACCGAGCCCGAATCAT
CTCGCTCGCAATCTCCCTGGCCGGACTCTTCTGCTTGGCCCTTCCTCTCGCCATGCTCACGACGATCCTCTTGCCTGTCC
CGCTCGGACGTTTGGCCACGACGAACCAGTTATCCAAGGCGCTTTCGGTAGTGGGCGCACTGCATGAGGCCCGGCAGGTT
CTTCCCAGCCTCCTCGTGACCTGGATTGTTCTCCTGCTCCACAGCCTCGGACAAGCGGTTCTCTTCAGCATTGCGTCACA
GTTCGCGCTCTTCCTGTGTTTGCCTGGCATCGCTGCGTCGGTCATCCTGGCGACCGGTCTCCAGGCACACCAGTACCTGG
TGATGGCCCATTTGACCGGCCAGATCCGCTATCGGCTCGAGCCTCACCGCGAACCCACTGCGGGAGAAGCGTAG

Upstream 100 bases:

>100_bases
CCGGGTTCGGAACTCTTCGTCCTGAGCAGCCAGTACTGGTACGGGCGGCTCTGCATGGACACGGTTGAATCATCGGCTGA
TCGATCGTGCGAGGATCGAC

Downstream 100 bases:

>100_bases
ATCAGATGCAGGGCCCGATCCTGCACGACGCAAAGGGGCAGGACTTGCTACGGATCGACTCAACCTCTATACTCGAAGTC
GGAACGTGGCAGATTGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MEIARALSAPFRDDDWPEKLVIAALLLLLPLIGPLLVLGWALHYAREVAEQRDRVLPHWQNWSEHLTLGLLGAVATVVWF
LPTLAVLALSALTLFPALLGDDRARIISLAISLAGLFCLALPLAMLTTILLPVPLGRLATTNQLSKALSVVGALHEARQV
LPSLLVTWIVLLLHSLGQAVLFSIASQFALFLCLPGIAASVILATGLQAHQYLVMAHLTGQIRYRLEPHREPTAGEA

Sequences:

>Translated_237_residues
MEIARALSAPFRDDDWPEKLVIAALLLLLPLIGPLLVLGWALHYAREVAEQRDRVLPHWQNWSEHLTLGLLGAVATVVWF
LPTLAVLALSALTLFPALLGDDRARIISLAISLAGLFCLALPLAMLTTILLPVPLGRLATTNQLSKALSVVGALHEARQV
LPSLLVTWIVLLLHSLGQAVLFSIASQFALFLCLPGIAASVILATGLQAHQYLVMAHLTGQIRYRLEPHREPTAGEA
>Mature_237_residues
MEIARALSAPFRDDDWPEKLVIAALLLLLPLIGPLLVLGWALHYAREVAEQRDRVLPHWQNWSEHLTLGLLGAVATVVWF
LPTLAVLALSALTLFPALLGDDRARIISLAISLAGLFCLALPLAMLTTILLPVPLGRLATTNQLSKALSVVGALHEARQV
LPSLLVTWIVLLLHSLGQAVLFSIASQFALFLCLPGIAASVILATGLQAHQYLVMAHLTGQIRYRLEPHREPTAGEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25689; Mature: 25689

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIARALSAPFRDDDWPEKLVIAALLLLLPLIGPLLVLGWALHYAREVAEQRDRVLPHWQ
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NWSEHLTLGLLGAVATVVWFLPTLAVLALSALTLFPALLGDDRARIISLAISLAGLFCLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LPLAMLTTILLPVPLGRLATTNQLSKALSVVGALHEARQVLPSLLVTWIVLLLHSLGQAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSIASQFALFLCLPGIAASVILATGLQAHQYLVMAHLTGQIRYRLEPHREPTAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MEIARALSAPFRDDDWPEKLVIAALLLLLPLIGPLLVLGWALHYAREVAEQRDRVLPHWQ
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NWSEHLTLGLLGAVATVVWFLPTLAVLALSALTLFPALLGDDRARIISLAISLAGLFCLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LPLAMLTTILLPVPLGRLATTNQLSKALSVVGALHEARQVLPSLLVTWIVLLLHSLGQAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSIASQFALFLCLPGIAASVILATGLQAHQYLVMAHLTGQIRYRLEPHREPTAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA