Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632594

Identifier: 221632594

GI number: 221632594

Start: 566444

End: 567214

Strand: Reverse

Name: 221632594

Synonym: trd_0569

Alternate gene names: NA

Gene position: 567214-566444 (Counterclockwise)

Preceding gene: 221632595

Following gene: 221632593

Centisome position: 28.32

GC content: 65.5

Gene sequence:

>771_bases
GTGGTTTTCCAAGATCCGTATTTCCACGCCCTCCGCCGCCGGTTGCAGGCTGCCCCCTACGATGAGGCCCGCCGCCGATT
GACCGCCCGGTTGGCCGAGACGACTCCTCATCCCCCGCGCCCACCCCACTTGACACCCGACGAGATCGCCCAGCGCGAGC
AATGGCTCTATCGCGAAGGTCTCGATCTCTACCTCCCCATCCTTCGTACCGTGCTCCGCGCCATCGCCCGCGAAGTCGAG
GCTGGGCTCGTCGAGCCGACCGAACTCGATCCGGAAGAGCTGACCTTCGCGACCTATCAGCGAGCCCGCAGCGAACTACG
AGAACTACCGCAACTTCCCCGCGATCGCTTCGCGTGGCTCCGTCGACTCGCACATGACACGGTCCATCGCGCGGCACTCG
CCCGCCACGCCGAGCGGCACCGAGGCACTGCGAGCGAGCCAACCGAGCACCCCGAAGCGCCGCCAGCCGAATTGCAGGGG
ACAGCAGCTCGTCTGGCCGCGGCCCTTGCAGACCCAGACCTTCCCTTGCCTGACGACCTCCTCGCTGATCCCGAGACCCG
TCGGTTGCTCGATCAGCTCCTGGACCGGCTACCCGAACAGTGGCGCGAAACGTACCTCCTTTCAGCTCTGGATCGTTGGA
GCGACGAACAGATCGCGGCAGTCACTGGCTTGCTTCCGGACGAAGTCCGTGCTCTCGTTCATGCGACGGTTCGACTTCTG
CGCGCGTGGCTGGAGGAATCGACTGTCCAACCGACTCGGCCGAAGGAGTGA

Upstream 100 bases:

>100_bases
CGATGGTCCCGAATATCGCCAAAGCTCTTCAGATGACAGTTCTCGGCGAATCCGCTATCCTGGAGTGGCCGGAATCGCAG
ACCGAGTGAGGAGCGACCAC

Downstream 100 bases:

>100_bases
GCGGCATGCGACGGAACGAGGAGGTTGCTCTCCTGCTCGACAACATCGCTGAACTTCTGATGCTCAAGAACGAGAACCCC
TATCGGATCCGCGCCTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MVFQDPYFHALRRRLQAAPYDEARRRLTARLAETTPHPPRPPHLTPDEIAQREQWLYREGLDLYLPILRTVLRAIAREVE
AGLVEPTELDPEELTFATYQRARSELRELPQLPRDRFAWLRRLAHDTVHRAALARHAERHRGTASEPTEHPEAPPAELQG
TAARLAAALADPDLPLPDDLLADPETRRLLDQLLDRLPEQWRETYLLSALDRWSDEQIAAVTGLLPDEVRALVHATVRLL
RAWLEESTVQPTRPKE

Sequences:

>Translated_256_residues
MVFQDPYFHALRRRLQAAPYDEARRRLTARLAETTPHPPRPPHLTPDEIAQREQWLYREGLDLYLPILRTVLRAIAREVE
AGLVEPTELDPEELTFATYQRARSELRELPQLPRDRFAWLRRLAHDTVHRAALARHAERHRGTASEPTEHPEAPPAELQG
TAARLAAALADPDLPLPDDLLADPETRRLLDQLLDRLPEQWRETYLLSALDRWSDEQIAAVTGLLPDEVRALVHATVRLL
RAWLEESTVQPTRPKE
>Mature_256_residues
MVFQDPYFHALRRRLQAAPYDEARRRLTARLAETTPHPPRPPHLTPDEIAQREQWLYREGLDLYLPILRTVLRAIAREVE
AGLVEPTELDPEELTFATYQRARSELRELPQLPRDRFAWLRRLAHDTVHRAALARHAERHRGTASEPTEHPEAPPAELQG
TAARLAAALADPDLPLPDDLLADPETRRLLDQLLDRLPEQWRETYLLSALDRWSDEQIAAVTGLLPDEVRALVHATVRLL
RAWLEESTVQPTRPKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29513; Mature: 29513

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFQDPYFHALRRRLQAAPYDEARRRLTARLAETTPHPPRPPHLTPDEIAQREQWLYREG
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
LDLYLPILRTVLRAIAREVEAGLVEPTELDPEELTFATYQRARSELRELPQLPRDRFAWL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRLAHDTVHRAALARHAERHRGTASEPTEHPEAPPAELQGTAARLAAALADPDLPLPDDL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
LADPETRRLLDQLLDRLPEQWRETYLLSALDRWSDEQIAAVTGLLPDEVRALVHATVRLL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH
RAWLEESTVQPTRPKE
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVFQDPYFHALRRRLQAAPYDEARRRLTARLAETTPHPPRPPHLTPDEIAQREQWLYREG
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
LDLYLPILRTVLRAIAREVEAGLVEPTELDPEELTFATYQRARSELRELPQLPRDRFAWL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RRLAHDTVHRAALARHAERHRGTASEPTEHPEAPPAELQGTAARLAAALADPDLPLPDDL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
LADPETRRLLDQLLDRLPEQWRETYLLSALDRWSDEQIAAVTGLLPDEVRALVHATVRLL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH
RAWLEESTVQPTRPKE
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA