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The map label for this gene is intQ [C]

Identifier: 221632578

GI number: 221632578

Start: 546244

End: 547323

Strand: Reverse

Name: intQ [C]

Synonym: trd_0553

Alternate gene names: 221632578

Gene position: 547323-546244 (Counterclockwise)

Preceding gene: 221632579

Following gene: 221632577

Centisome position: 27.33

GC content: 64.17

Gene sequence:

>1080_bases
ATGGCCACGATCCGCCGACGCAAGAGCGGCTTGTTCGAAGCTCGGCTGCAGCGGGACGGACGACGTTTCTCGGTCTACGG
CCGGACGGAAACGGAAGTCCGGCAGAAGCTGGCCGAACTGGAACGCAAGCTGGCCATCGACCAGGCACCACCGGTGGGAC
GGGTGACGGTTCGGGAACTCTGCGAACGCTGGCTTGCGACGGAACGCAAGCGTTGGAAACCCAAGACGTACTACGACTAC
CGGTGGCATCTGGAGCACCACGTCTACCCGGTCCTCGGCCGGGTACAGCTGTCGAAACTCACCCCAGACCGCCTACAGCG
ATTCTTCGATTCCCTTTCCGGTCGGTCGGCCAACTTGACTTTTCGGCTCCTGCATCGCTGCTTCGTTGTGGGTATCCGAT
GGGGTTTTCTCGGTCAGAATCCTTGCGACCGGGTCGTCCCACCGGCCTACCAGGCGCCGCCAATCGAATTACCTGATGCC
GATGCCTTGGCTCGCCTATTCCGGTACTGCCTGGAGAGCGACGACCCCTACGCCGGCCTGGTGGGGTTGTCCCTTCTCTG
CGGACTGCGGCGGGGGGAAATCACGGCGCTGCGCTGGTCGGATATCGACCTCCAGACTGGTCAACTCAGCGTCGTCCGCT
CCGGCCAGTGGATTGCCGGCCGATGGGTGGAGACAGAACCCAAGACCAGAGCTGGTCGACGGACCATCTACGTCGGGGAA
CAAGGGATACGGCTACTCCGGCGACAGAAGGCACTGGTAGCACAGCTGAAGCTCCAGGCTGGACCGGCCTGGCAGGAACA
CGGGTTGGTCTTCCCGGGACCAAACGGCCAGCCGCTTTCCCCTAGCCGGGTCGCCGCTGCCGTGCAGCGAATCTGCAAGG
CGTCTGGTGTCCCCCCGCTCCGGCACCACTCGCTGCGGCACGCCTCGGCCAGCTTGGCCTTGTTGGCCGGCGTTCCCCTG
CCTGAGGTGAGCCGACAATTGGGTCATGCGAATGTCTCCATCACAGCTCGGGTCTATAGCCACTGCATCTCCGACGGCCG
GCGGGTCACCGAGGCGATCGAGCGGGTGTTGGCTGGGTGA

Upstream 100 bases:

>100_bases
GCTCCTAGGATTCCCCACCAGCACGGCCATCTCGACGCCGTACCCCACGCATACCCCACCAGCAGCCGGGGACGCTCTCT
GACGAAAAGGGGGGTGTTCC

Downstream 100 bases:

>100_bases
GCCATGACCAGGGGGTGCACGGCCGCTGGTTCAACCCGGACCGTGCACCCAACCGCCTGGCATGGGACTGCAGCCTGCTG
GCCGGTAGGCGATGACTGCC

Product: putative integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MATIRRRKSGLFEARLQRDGRRFSVYGRTETEVRQKLAELERKLAIDQAPPVGRVTVRELCERWLATERKRWKPKTYYDY
RWHLEHHVYPVLGRVQLSKLTPDRLQRFFDSLSGRSANLTFRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPIELPDA
DALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGE
QGIRLLRRQKALVAQLKLQAGPAWQEHGLVFPGPNGQPLSPSRVAAAVQRICKASGVPPLRHHSLRHASASLALLAGVPL
PEVSRQLGHANVSITARVYSHCISDGRRVTEAIERVLAG

Sequences:

>Translated_359_residues
MATIRRRKSGLFEARLQRDGRRFSVYGRTETEVRQKLAELERKLAIDQAPPVGRVTVRELCERWLATERKRWKPKTYYDY
RWHLEHHVYPVLGRVQLSKLTPDRLQRFFDSLSGRSANLTFRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPIELPDA
DALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGE
QGIRLLRRQKALVAQLKLQAGPAWQEHGLVFPGPNGQPLSPSRVAAAVQRICKASGVPPLRHHSLRHASASLALLAGVPL
PEVSRQLGHANVSITARVYSHCISDGRRVTEAIERVLAG
>Mature_358_residues
ATIRRRKSGLFEARLQRDGRRFSVYGRTETEVRQKLAELERKLAIDQAPPVGRVTVRELCERWLATERKRWKPKTYYDYR
WHLEHHVYPVLGRVQLSKLTPDRLQRFFDSLSGRSANLTFRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPIELPDAD
ALARLFRYCLESDDPYAGLVGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGEQ
GIRLLRRQKALVAQLKLQAGPAWQEHGLVFPGPNGQPLSPSRVAAAVQRICKASGVPPLRHHSLRHASASLALLAGVPLP
EVSRQLGHANVSITARVYSHCISDGRRVTEAIERVLAG

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 40575; Mature: 40444

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIRRRKSGLFEARLQRDGRRFSVYGRTETEVRQKLAELERKLAIDQAPPVGRVTVREL
CCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
CERWLATERKRWKPKTYYDYRWHLEHHVYPVLGRVQLSKLTPDRLQRFFDSLSGRSANLT
HHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHEEHHCCCHHHHHHHHHHHCCCCCCHH
FRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPIELPDADALARLFRYCLESDDPYAGL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGE
HHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCEEECCEECCCCCCCCCCEEEEECH
QGIRLLRRQKALVAQLKLQAGPAWQEHGLVFPGPNGQPLSPSRVAAAVQRICKASGVPPL
HHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
RHHSLRHASASLALLAGVPLPEVSRQLGHANVSITARVYSHCISDGRRVTEAIERVLAG
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATIRRRKSGLFEARLQRDGRRFSVYGRTETEVRQKLAELERKLAIDQAPPVGRVTVREL
CCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
CERWLATERKRWKPKTYYDYRWHLEHHVYPVLGRVQLSKLTPDRLQRFFDSLSGRSANLT
HHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHEEHHCCCHHHHHHHHHHHCCCCCCHH
FRLLHRCFVVGIRWGFLGQNPCDRVVPPAYQAPPIELPDADALARLFRYCLESDDPYAGL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VGLSLLCGLRRGEITALRWSDIDLQTGQLSVVRSGQWIAGRWVETEPKTRAGRRTIYVGE
HHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCEEECCEECCCCCCCCCCEEEEECH
QGIRLLRRQKALVAQLKLQAGPAWQEHGLVFPGPNGQPLSPSRVAAAVQRICKASGVPPL
HHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
RHHSLRHASASLALLAGVPLPEVSRQLGHANVSITARVYSHCISDGRRVTEAIERVLAG
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]