| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221632577
Identifier: 221632577
GI number: 221632577
Start: 545790
End: 545972
Strand: Reverse
Name: 221632577
Synonym: trd_0552
Alternate gene names: NA
Gene position: 545972-545790 (Counterclockwise)
Preceding gene: 221632578
Following gene: 221632576
Centisome position: 27.26
GC content: 61.2
Gene sequence:
>183_bases ATGATGCTGGTCGTCAAGGTTAGCCGATTCCGACCCGGCCAACTCGAACCTGAGGCGGTCGTGGCCACGACCGACCAGGC GATTTGCCAGGCAGTGCTTCGGCTCATCCGTGAGCGGCTAGCCAGAGAGGAGGAACAGGATGGACTAGTGAGCAAGCCAA CGGTGCGACGGACGGATGACTGA
Upstream 100 bases:
>100_bases GTTTGTCAACCAACTCCCCCGCTCAAGCGTTCTAATTAAGTAGAAGGTCAATTGCAGGACCCCGGTCGATGACCGGGGTC CAGTCGTTGCAAGGAGGTTC
Downstream 100 bases:
>100_bases ACCGACCCGGTGCTGCCACCACCGGGTCGGTCGAACCAAAGGAGGTGTGTGATGACAGTCGCAGTATCGCCTACGCTACC CTACGCTATCAAGTACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MMLVVKVSRFRPGQLEPEAVVATTDQAICQAVLRLIRERLAREEEQDGLVSKPTVRRTDD
Sequences:
>Translated_60_residues MMLVVKVSRFRPGQLEPEAVVATTDQAICQAVLRLIRERLAREEEQDGLVSKPTVRRTDD >Mature_60_residues MMLVVKVSRFRPGQLEPEAVVATTDQAICQAVLRLIRERLAREEEQDGLVSKPTVRRTDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6822; Mature: 6822
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLVVKVSRFRPGQLEPEAVVATTDQAICQAVLRLIRERLAREEEQDGLVSKPTVRRTDD CEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMLVVKVSRFRPGQLEPEAVVATTDQAICQAVLRLIRERLAREEEQDGLVSKPTVRRTDD CEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA