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The map label for this gene is csaA [H]

Identifier: 221632519

GI number: 221632519

Start: 489566

End: 489910

Strand: Reverse

Name: csaA [H]

Synonym: trd_0493

Alternate gene names: 221632519

Gene position: 489910-489566 (Counterclockwise)

Preceding gene: 221632521

Following gene: 221632518

Centisome position: 24.46

GC content: 64.06

Gene sequence:

>345_bases
ATGGAAGCCAAACCGCCGATCGAGCTCGCCGATTTTCAACGCGTCGATCTGCGTGTCGGGCGAATCGTTGCCGTGGAGGA
GTTTCCGGAGGCACGCCGACCATCGTACAAGCTGACCATCGATTTCGGGCCGCTGGGGGTCAAGCGCTCCTCGGCAGCCA
TCCGTCCCTGGTACGCGCCCGAAGATCTCATCGGCCGGCTGATCATCGCGGTCGTCAACCTCCCCGTCCGACGGGTCGCC
GGTTTCCCCTCGGAAGTGCTTGTCCTGGGCGCTATCCAGCCGGATGGACGGGTCATCTTGCTCCAGCCAGACCAACCAAC
CGATCCGGGCAACCCGATCGCCTAG

Upstream 100 bases:

>100_bases
CGGATCGGTCGTCTCTCGCCGGTACTGCATCGATGCCACACTCCGAACCTAACTGCAGCCGATACGATGGTACGCTTCCC
AGCGCAAGAAAGGAGGCGAG

Downstream 100 bases:

>100_bases
TCGATGACCGCACCGCGCTCGCGCGGACCGGGCGCTTCTGGCGTTCCCACCAGTGACCGGGTAGGGATCATTCGGACAAA
AACCCGGATACGATGGACCC

Product: protein csaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MEAKPPIELADFQRVDLRVGRIVAVEEFPEARRPSYKLTIDFGPLGVKRSSAAIRPWYAPEDLIGRLIIAVVNLPVRRVA
GFPSEVLVLGAIQPDGRVILLQPDQPTDPGNPIA

Sequences:

>Translated_114_residues
MEAKPPIELADFQRVDLRVGRIVAVEEFPEARRPSYKLTIDFGPLGVKRSSAAIRPWYAPEDLIGRLIIAVVNLPVRRVA
GFPSEVLVLGAIQPDGRVILLQPDQPTDPGNPIA
>Mature_114_residues
MEAKPPIELADFQRVDLRVGRIVAVEEFPEARRPSYKLTIDFGPLGVKRSSAAIRPWYAPEDLIGRLIIAVVNLPVRRVA
GFPSEVLVLGAIQPDGRVILLQPDQPTDPGNPIA

Specific function: Could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the secA protein [H]

COG id: COG0073

COG function: function code R; EMAP domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR008231
- InterPro:   IPR002547 [H]

Pfam domain/function: PF01588 tRNA_bind [H]

EC number: NA

Molecular weight: Translated: 12518; Mature: 12518

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKPPIELADFQRVDLRVGRIVAVEEFPEARRPSYKLTIDFGPLGVKRSSAAIRPWYAP
CCCCCCCCCCCCEEEEEEECEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
EDLIGRLIIAVVNLPVRRVAGFPSEVLVLGAIQPDGRVILLQPDQPTDPGNPIA
HHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEAKPPIELADFQRVDLRVGRIVAVEEFPEARRPSYKLTIDFGPLGVKRSSAAIRPWYAP
CCCCCCCCCCCCEEEEEEECEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
EDLIGRLIIAVVNLPVRRVAGFPSEVLVLGAIQPDGRVILLQPDQPTDPGNPIA
HHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1435734; 9384377 [H]