Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632496

Identifier: 221632496

GI number: 221632496

Start: 467567

End: 468100

Strand: Reverse

Name: 221632496

Synonym: trd_0470

Alternate gene names: NA

Gene position: 468100-467567 (Counterclockwise)

Preceding gene: 221632497

Following gene: 221632495

Centisome position: 23.37

GC content: 59.18

Gene sequence:

>534_bases
ATGCGATACGTGCGGCTGATCTTGTTCGTCTTGATCGTGCTCGTTGTCATGGCTGTTCCGCTTGCTCTCGTGCTTGCTCG
GAGTTACTTCCTCGCCCCGACAGCTCAACCGGTCAAAGCACAGCCGATTCAGTTTCCCCATTCCGTGCACGTCCAGGCAG
TCGGCTTGGACTGCACCTATTGCCACCGGAATGCGACGACCTCTGCCCAAGCGACACTCCCGCCGCTCGAACTCTGTATG
CAATGCCACAAGATCATCCCCACACAGGGCCGTCCTGAACTCGAAAAGCTCGTCGCCGCCTTCCAGCAGGGACAACCGAT
CTTGTGGAACAAGGTCCATCAGCTTCCCGACCACACCCACTTCGTCCATTCGGTCCACTTGAGTTTCGGCTTCCAGTGTT
CGACCTGCCACGGCGATGTTGGTGCCATGGGCAAGCCCGGGGTGAAGCAGGTCCGGGATCTCCGCATGGGTGACTGCATT
ACCTGCCACCAGCAGAACGGCGCACGGACTGACTGCTCGGTGTGCCACTACTGA

Upstream 100 bases:

>100_bases
ATCCAAGTCCTCTACGAGATTTGGCCGCAGCGCTGGATTTGAGCCGAGGCAGAACCGACCTAGTCGAGAGCGAGTCGAGC
TGAAGAATGGAGTCGGTGGG

Downstream 100 bases:

>100_bases
TCCGAACAGACGGCTCGACGACGATGTGGGGAGGCTGACATTGGAGATGGGCATGCGGCGAAGAGATTTTCTCAAGGTGG
CCGCAACCTCAGCGACCGGT

Product: chaperone protein HtpG

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C Class I; Cytochrome C Mono- And Diheme Variant; Molybdopterin Oxidoreductase Subunit; Multiheme Cytochrome Domain Protein; Cytochrome C Class III Family Protein; Lipoprotein Cytochrome C; Cytochrome C Domain-Containing Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTYCHRNATTSAQATLPPLELCM
QCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTHFVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCI
TCHQQNGARTDCSVCHY

Sequences:

>Translated_177_residues
MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTYCHRNATTSAQATLPPLELCM
QCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTHFVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCI
TCHQQNGARTDCSVCHY
>Mature_177_residues
MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTYCHRNATTSAQATLPPLELCM
QCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTHFVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCI
TCHQQNGARTDCSVCHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19645; Mature: 19645

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEE
CHRNATTSAQATLPPLELCMQCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTH
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
FVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCITCHQQNGARTDCSVCHY
HHHEEEHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEE
CHRNATTSAQATLPPLELCMQCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTH
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHH
FVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCITCHQQNGARTDCSVCHY
HHHEEEHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA