| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632496
Identifier: 221632496
GI number: 221632496
Start: 467567
End: 468100
Strand: Reverse
Name: 221632496
Synonym: trd_0470
Alternate gene names: NA
Gene position: 468100-467567 (Counterclockwise)
Preceding gene: 221632497
Following gene: 221632495
Centisome position: 23.37
GC content: 59.18
Gene sequence:
>534_bases ATGCGATACGTGCGGCTGATCTTGTTCGTCTTGATCGTGCTCGTTGTCATGGCTGTTCCGCTTGCTCTCGTGCTTGCTCG GAGTTACTTCCTCGCCCCGACAGCTCAACCGGTCAAAGCACAGCCGATTCAGTTTCCCCATTCCGTGCACGTCCAGGCAG TCGGCTTGGACTGCACCTATTGCCACCGGAATGCGACGACCTCTGCCCAAGCGACACTCCCGCCGCTCGAACTCTGTATG CAATGCCACAAGATCATCCCCACACAGGGCCGTCCTGAACTCGAAAAGCTCGTCGCCGCCTTCCAGCAGGGACAACCGAT CTTGTGGAACAAGGTCCATCAGCTTCCCGACCACACCCACTTCGTCCATTCGGTCCACTTGAGTTTCGGCTTCCAGTGTT CGACCTGCCACGGCGATGTTGGTGCCATGGGCAAGCCCGGGGTGAAGCAGGTCCGGGATCTCCGCATGGGTGACTGCATT ACCTGCCACCAGCAGAACGGCGCACGGACTGACTGCTCGGTGTGCCACTACTGA
Upstream 100 bases:
>100_bases ATCCAAGTCCTCTACGAGATTTGGCCGCAGCGCTGGATTTGAGCCGAGGCAGAACCGACCTAGTCGAGAGCGAGTCGAGC TGAAGAATGGAGTCGGTGGG
Downstream 100 bases:
>100_bases TCCGAACAGACGGCTCGACGACGATGTGGGGAGGCTGACATTGGAGATGGGCATGCGGCGAAGAGATTTTCTCAAGGTGG CCGCAACCTCAGCGACCGGT
Product: chaperone protein HtpG
Products: NA
Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C Class I; Cytochrome C Mono- And Diheme Variant; Molybdopterin Oxidoreductase Subunit; Multiheme Cytochrome Domain Protein; Cytochrome C Class III Family Protein; Lipoprotein Cytochrome C; Cytochrome C Domain-Containing Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTYCHRNATTSAQATLPPLELCM QCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTHFVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCI TCHQQNGARTDCSVCHY
Sequences:
>Translated_177_residues MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTYCHRNATTSAQATLPPLELCM QCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTHFVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCI TCHQQNGARTDCSVCHY >Mature_177_residues MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTYCHRNATTSAQATLPPLELCM QCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTHFVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCI TCHQQNGARTDCSVCHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19645; Mature: 19645
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEE CHRNATTSAQATLPPLELCMQCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTH CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHH FVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCITCHQQNGARTDCSVCHY HHHEEEHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MRYVRLILFVLIVLVVMAVPLALVLARSYFLAPTAQPVKAQPIQFPHSVHVQAVGLDCTY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEE CHRNATTSAQATLPPLELCMQCHKIIPTQGRPELEKLVAAFQQGQPILWNKVHQLPDHTH CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHH FVHSVHLSFGFQCSTCHGDVGAMGKPGVKQVRDLRMGDCITCHQQNGARTDCSVCHY HHHEEEHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA