Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632397

Identifier: 221632397

GI number: 221632397

Start: 371849

End: 372949

Strand: Reverse

Name: 221632397

Synonym: trd_0369

Alternate gene names: NA

Gene position: 372949-371849 (Counterclockwise)

Preceding gene: 221632398

Following gene: 221632396

Centisome position: 18.62

GC content: 63.03

Gene sequence:

>1101_bases
ATGCGCCGACGAGCATTTCTCGGCACCCTCGCACTCGGGCTGCTCGCCTGCCGAAGCTCCAATGGGCCGCAGTCACAGGA
GCCGATGGGGCCGACCCCATCAGCCAGCCCGCGACCAGCCAGTCTCTTCCTCACACCACCGCCAGCACCCGGCCCAGTCG
TGTTTCCGCGTGATTTCGGCTCCCACGATGTTTTGACCGAATGGTGGTACGACACTGGTCATCTTCGATCCGCGGCGGGC
GAGCGGTTCGGTTTCGAGTTCGTCATCTTCCAGGTGCAGCGCTTCGGCTATCCCGTCGTCTATGCCGCACACGCTGCGCT
GACGCTCGTCGATCGACAGGCCTTCCTGTGGGACGAACGGTTGATCGCTGTCCCGCAGCGGCAGGAGAGCTGGCCACTGG
CCCTTGCCGTCGGCGATTGGACACTGACCAGCGATGGTGAGTCGGATCGGATCACGGTCCGCAGCGGATCGTTCGGCTTT
ACCCTGGAACTCCAAAATCTCCGCCCACCGCTCCTGCATGACGAGGATGGCTACTTTTCCTGGGCACCAGAGACCGGCTC
CTACTACTATTCGCGCACACGGTTGGCGACCCGGGGCGTCGTTTCTGTCGGCGGTCACGACGTCAGCGTTTCTGGCGTCG
CGTGGAACGATCACCAGTGGGGCAACTTTCTCCTCGGAGGAGGCGGGTGGGATTGGTTCGCCATTCAACTCGAAGACGGC
ACCGACCTCATGCTCTGGCAATCGCGTGATGCTGCTCAACGCGTCATCCAGCGGAGCGGCACGCTGCTCCGAGCCGATGG
AAGTATCCGCTGGCTGCACGACGCCGAGATCGGTCTCCACGCGACCGGATCCTGGCAAAGTCCGCACAGCGGTGCGATCT
ACCCGAGCGGGTGGCAGATCGAGCTCCCTCCTGACATGACGCTCACGGTTACCCCGCTCGTCCTCGATCAGGAGTTGCAA
ACCGTGCGTTCGACGGGAGTGATCTACTGGGAAGGCGCTGTTTCGGTCATCGCTGCACAGGCTGGTGTGAAAACAATCGG
TCAGGGGTACGTGGAGCTGACCGGATACGCCACACCCTCGGTTCCGGTTACCCCACCGTGA

Upstream 100 bases:

>100_bases
GCTGCTCGTCCCCGCCACGATGCGCCTACTCGGCCAATGGAACTGGTGGGTTCCGCGCCGCCTCGCGCGGACTCTCGACA
CGGTACGGATCGGACACTGA

Downstream 100 bases:

>100_bases
GCGATCAGGTCCAGTGAACAAGCCGGGACGGCATGACGCAGCGGAGCACACGCGAGTACTCTTGACAGGTCTCAGCGAAA
ACGCTAGAATAGCCGCCAAC

Product: putative AttH

Products: NA

Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRRRAFLGTLALGLLACRSSNGPQSQEPMGPTPSASPRPASLFLTPPPAPGPVVFPRDFGSHDVLTEWWYDTGHLRSAAG
ERFGFEFVIFQVQRFGYPVVYAAHAALTLVDRQAFLWDERLIAVPQRQESWPLALAVGDWTLTSDGESDRITVRSGSFGF
TLELQNLRPPLLHDEDGYFSWAPETGSYYYSRTRLATRGVVSVGGHDVSVSGVAWNDHQWGNFLLGGGGWDWFAIQLEDG
TDLMLWQSRDAAQRVIQRSGTLLRADGSIRWLHDAEIGLHATGSWQSPHSGAIYPSGWQIELPPDMTLTVTPLVLDQELQ
TVRSTGVIYWEGAVSVIAAQAGVKTIGQGYVELTGYATPSVPVTPP

Sequences:

>Translated_366_residues
MRRRAFLGTLALGLLACRSSNGPQSQEPMGPTPSASPRPASLFLTPPPAPGPVVFPRDFGSHDVLTEWWYDTGHLRSAAG
ERFGFEFVIFQVQRFGYPVVYAAHAALTLVDRQAFLWDERLIAVPQRQESWPLALAVGDWTLTSDGESDRITVRSGSFGF
TLELQNLRPPLLHDEDGYFSWAPETGSYYYSRTRLATRGVVSVGGHDVSVSGVAWNDHQWGNFLLGGGGWDWFAIQLEDG
TDLMLWQSRDAAQRVIQRSGTLLRADGSIRWLHDAEIGLHATGSWQSPHSGAIYPSGWQIELPPDMTLTVTPLVLDQELQ
TVRSTGVIYWEGAVSVIAAQAGVKTIGQGYVELTGYATPSVPVTPP
>Mature_366_residues
MRRRAFLGTLALGLLACRSSNGPQSQEPMGPTPSASPRPASLFLTPPPAPGPVVFPRDFGSHDVLTEWWYDTGHLRSAAG
ERFGFEFVIFQVQRFGYPVVYAAHAALTLVDRQAFLWDERLIAVPQRQESWPLALAVGDWTLTSDGESDRITVRSGSFGF
TLELQNLRPPLLHDEDGYFSWAPETGSYYYSRTRLATRGVVSVGGHDVSVSGVAWNDHQWGNFLLGGGGWDWFAIQLEDG
TDLMLWQSRDAAQRVIQRSGTLLRADGSIRWLHDAEIGLHATGSWQSPHSGAIYPSGWQIELPPDMTLTVTPLVLDQELQ
TVRSTGVIYWEGAVSVIAAQAGVKTIGQGYVELTGYATPSVPVTPP

Specific function: Unknown

COG id: COG5621

COG function: function code R; Predicted secreted hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40178; Mature: 40178

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRAFLGTLALGLLACRSSNGPQSQEPMGPTPSASPRPASLFLTPPPAPGPVVFPRDFG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCC
SHDVLTEWWYDTGHLRSAAGERFGFEFVIFQVQRFGYPVVYAAHAALTLVDRQAFLWDER
CCCCCHHHCCCCCHHHHHCCCCCCEEEEEEEEHHCCCCEEEEHHEEEEEECCHHHEECCE
LIAVPQRQESWPLALAVGDWTLTSDGESDRITVRSGSFGFTLELQNLRPPLLHDEDGYFS
EEECCCCCCCCCEEEEEECEEEECCCCCCEEEEECCCEEEEEEECCCCCCCEECCCCCEE
WAPETGSYYYSRTRLATRGVVSVGGHDVSVSGVAWNDHQWGNFLLGGGGWDWFAIQLEDG
ECCCCCCEEEEEEEEEECCEEEECCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCC
TDLMLWQSRDAAQRVIQRSGTLLRADGSIRWLHDAEIGLHATGSWQSPHSGAIYPSGWQI
CEEEEECCCHHHHHHHHHCCCEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEE
ELPPDMTLTVTPLVLDQELQTVRSTGVIYWEGAVSVIAAQAGVKTIGQGYVELTGYATPS
ECCCCCEEEEEEEEECHHHHHHHHCCEEEECCCEEEEHHHCCHHHHCCCEEEEEEECCCC
VPVTPP
CCCCCC
>Mature Secondary Structure
MRRRAFLGTLALGLLACRSSNGPQSQEPMGPTPSASPRPASLFLTPPPAPGPVVFPRDFG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCC
SHDVLTEWWYDTGHLRSAAGERFGFEFVIFQVQRFGYPVVYAAHAALTLVDRQAFLWDER
CCCCCHHHCCCCCHHHHHCCCCCCEEEEEEEEHHCCCCEEEEHHEEEEEECCHHHEECCE
LIAVPQRQESWPLALAVGDWTLTSDGESDRITVRSGSFGFTLELQNLRPPLLHDEDGYFS
EEECCCCCCCCCEEEEEECEEEECCCCCCEEEEECCCEEEEEEECCCCCCCEECCCCCEE
WAPETGSYYYSRTRLATRGVVSVGGHDVSVSGVAWNDHQWGNFLLGGGGWDWFAIQLEDG
ECCCCCCEEEEEEEEEECCEEEECCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCC
TDLMLWQSRDAAQRVIQRSGTLLRADGSIRWLHDAEIGLHATGSWQSPHSGAIYPSGWQI
CEEEEECCCHHHHHHHHHCCCEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEE
ELPPDMTLTVTPLVLDQELQTVRSTGVIYWEGAVSVIAAQAGVKTIGQGYVELTGYATPS
ECCCCCEEEEEEEEECHHHHHHHHCCEEEECCCEEEEHHHCCHHHHCCCEEEEEEECCCC
VPVTPP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA