| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is maf [C]
Identifier: 221632249
GI number: 221632249
Start: 225611
End: 226267
Strand: Reverse
Name: maf [C]
Synonym: trd_0215
Alternate gene names: 221632249
Gene position: 226267-225611 (Counterclockwise)
Preceding gene: 221632250
Following gene: 221632248
Centisome position: 11.3
GC content: 66.51
Gene sequence:
>657_bases GTGACGCTGGTCCTCGCCTCGGCCTCGCCGCGCCGGCGTGCGCTCTTGGCCGTACTCGGCATCCCCTTCGTCGTCGATCC CGCGGCGATCGACGAGCCGCTCCCGGAACGGCACTCCCATCCGGAGCGTATCGCCCGCGCATTGGCACGTCACAAGGCCA CGGTCGTCGCCGCCCGGCGGCCGGGCGACTGGGTACTGGCAGCTGACACGGTCGTCGTCTTTCGTGGCCGGCTACTTGGT AAGCCGGAGAGCGCGGAGGAAGCACATGCCATGTTGCGCCTCCTGCGTGGGCGCTGGCACCGAGTTATCACTGCTGTCGC GCTCGCTCGTGGTCGTCGCCGTTGGGTCGATCACACCACGACCTGGGTCCTCATGCGCCAGTACAGCGACGAGGACATCA CGGCCAGCATCGCCCGCGGTGAGCCGTTCGACAAAGCGGGAGGCTACGCAATTCAGGATCCCGACCTACGCCCAGTCGAG AGCTGGCGCGGCTGCTATTGCAACGTAGTCGGTCTCTCCATCTGGCTGACCTGGCGACTCCTCCAGCAAGCCGGTTTTCC AGTCTCCACACCAGACGAGCGTACTCTCCCGCCGGTCTGCCAGCAGTGTCCTCTCGCACCAGCAGAAGTCACCTCGCGCA CAGCCAACAGGGAGTAG
Upstream 100 bases:
>100_bases ACGGCGGTTACCGACTACTCGATGTCACACCGCTCGACATGTTCCCACAGACCTACCACATCGAGTCGGTCGCGACACTG GAGCTGGCCGAGGGAACGCC
Downstream 100 bases:
>100_bases CATGGATGCCTGCGGGAACGAGGCGACTGAGGCGGCCAGCGGTGTGATGGTCGCACCACGAGGCAGCGAAGACGCCAACG GGTAAATGCCGGATCCTGCA
Product: septum formation protein Maf
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTLVLASASPRRRALLAVLGIPFVVDPAAIDEPLPERHSHPERIARALARHKATVVAARRPGDWVLAADTVVVFRGRLLG KPESAEEAHAMLRLLRGRWHRVITAVALARGRRRWVDHTTTWVLMRQYSDEDITASIARGEPFDKAGGYAIQDPDLRPVE SWRGCYCNVVGLSIWLTWRLLQQAGFPVSTPDERTLPPVCQQCPLAPAEVTSRTANRE
Sequences:
>Translated_218_residues MTLVLASASPRRRALLAVLGIPFVVDPAAIDEPLPERHSHPERIARALARHKATVVAARRPGDWVLAADTVVVFRGRLLG KPESAEEAHAMLRLLRGRWHRVITAVALARGRRRWVDHTTTWVLMRQYSDEDITASIARGEPFDKAGGYAIQDPDLRPVE SWRGCYCNVVGLSIWLTWRLLQQAGFPVSTPDERTLPPVCQQCPLAPAEVTSRTANRE >Mature_217_residues TLVLASASPRRRALLAVLGIPFVVDPAAIDEPLPERHSHPERIARALARHKATVVAARRPGDWVLAADTVVVFRGRLLGK PESAEEAHAMLRLLRGRWHRVITAVALARGRRRWVDHTTTWVLMRQYSDEDITASIARGEPFDKAGGYAIQDPDLRPVES WRGCYCNVVGLSIWLTWRLLQQAGFPVSTPDERTLPPVCQQCPLAPAEVTSRTANRE
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=200, Percent_Identity=36, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI291045183, Length=194, Percent_Identity=33.5051546391753, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI291045181, Length=153, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310133124, Length=133, Percent_Identity=35.3383458646617, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1789646, Length=181, Percent_Identity=43.0939226519337, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87081830, Length=189, Percent_Identity=30.1587301587302, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI193202443, Length=177, Percent_Identity=32.2033898305085, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI78706856, Length=181, Percent_Identity=34.2541436464088, Blast_Score=81, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y215_THERP (B9KXM8)
Other databases:
- EMBL: CP001275 - RefSeq: YP_002521470.1 - ProteinModelPortal: B9KXM8 - GeneID: 7354650 - GenomeReviews: CP001275_GR - KEGG: tro:trd_0215 - OMA: VVGLPLC - ProtClustDB: CLSK2807447 - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 24331; Mature: 24200
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: ACT_SITE 32-32
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVLASASPRRRALLAVLGIPFVVDPAAIDEPLPERHSHPERIARALARHKATVVAARR CEEEEECCCCHHHHHHHHHCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEECC PGDWVLAADTVVVFRGRLLGKPESAEEAHAMLRLLRGRWHRVITAVALARGRRRWVDHTT CCCEEEEHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWVLMRQYSDEDITASIARGEPFDKAGGYAIQDPDLRPVESWRGCYCNVVGLSIWLTWRL HHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCCCCCHHHHCCCEEHHHHHHHHHHHHH LQQAGFPVSTPDERTLPPVCQQCPLAPAEVTSRTANRE HHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCC >Mature Secondary Structure TLVLASASPRRRALLAVLGIPFVVDPAAIDEPLPERHSHPERIARALARHKATVVAARR EEEEECCCCHHHHHHHHHCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEECC PGDWVLAADTVVVFRGRLLGKPESAEEAHAMLRLLRGRWHRVITAVALARGRRRWVDHTT CCCEEEEHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWVLMRQYSDEDITASIARGEPFDKAGGYAIQDPDLRPVESWRGCYCNVVGLSIWLTWRL HHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCCCCCHHHHCCCEEHHHHHHHHHHHHH LQQAGFPVSTPDERTLPPVCQQCPLAPAEVTSRTANRE HHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA