Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632225

Identifier: 221632225

GI number: 221632225

Start: 196656

End: 197651

Strand: Reverse

Name: 221632225

Synonym: trd_0191

Alternate gene names: NA

Gene position: 197651-196656 (Counterclockwise)

Preceding gene: 221632226

Following gene: 221632224

Centisome position: 9.87

GC content: 66.37

Gene sequence:

>996_bases
ATGAACGCGATCACCTGGTTGCTCTGGGCACTCGTGCTGGTGCTCGCGATCTCCGTGACGCGCAATCCGTTCTACTTGAG
CCTGGCAGCGCTGGCCGTTGCGACCGTCTGGATCGCAGTCGATACGGCGCGGCCGCTCGGCCGGCAGGCGCCTCGCTTAC
CGCTCCTGGCTGCTGGCTTTCTCCTACCGTGGAGCACCGCCGTCAATGCGCTGCTTGCCCACATCGGCGACCGCGTCCTC
TTCCGACTTCCCGCCTGGCCGGTCATCGGCGGACCCATCACGCTCAATGCAGCACTCTACGGCTTGCTCACCGGCATCGC
ACTGACCACGGCACTCGCCGGAACGACTCTCCTTCACGCCGTCATCGATCGTCACCAGGCTCTGCGCGCGATTCCTCCCA
ATCAGCGTGTGCTCGCGACCACTCTCGCGATTGCCCTGAACGCGCTCCCTGCTTTCGCGACAGCAGCACGCGATGCGGTC
GAAGCGTCGCGCCTGCGCGGCCTGGCACTGCCACGCTGGAGGCAGCTTCAGATCGTCGTAGCAGCGATCCTCTATCGTGG
TATCGACTACAGTCTCGCCACAGCTGAGGTACTGGAGACGCGGAGCTTCGCTGCGCGGCACCGGGCGAGACCCGCTACGC
AAGCCAGTTCGCTCGCGATGCTCCTCGCTAGCTTCGCCGTCATCGGAGGCAGCCTGGCTGGGAAACCGAGCCTCGCTCTG
GTCGGCGTTGCCGGGCTGTCCCTCGGTTCGGCGCTGATCGTCCACTCGACCTGGCGCAATCTCCGCACTCTGCAGTGGTC
ACTCGCGACCGGAGCGGCGGCGTCGCTCTTGCTCGCAGCCTCGACCCTCCTCGTCCTGTCGCTCCGCGACTCCGCTGCCG
ACCTGGCGTACTCGCCTTATCCGGCTTTGCGCTGGCCGGGTTTCTCTCCGCTCGCCGGGTTCGCCTTTCTCCTGCTCGCC
TCACCGGCACTCTTTCTGCGAGGATCCGCGCGATGA

Upstream 100 bases:

>100_bases
GCCATCCTACTGGCCCGCCCTGGGGCGCGCTCCTCTTCACGAGTCTCGCGGCCATCGTCCTGCTCGCGTACTCGTTCGCC
CGCTGGCGGAGGCGGTCACC

Downstream 100 bases:

>100_bases
TCGAAGTGGAGGCACTCCGCTACCGCTACCCCACGAGCCGGTATCCAGCACTGGTCGCCCCGCACTGGGCAGTGGAAGCT
GGTGAGTTCGTGCTCTTGGC

Product: putative Cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNAITWLLWALVLVLAISVTRNPFYLSLAALAVATVWIAVDTARPLGRQAPRLPLLAAGFLLPWSTAVNALLAHIGDRVL
FRLPAWPVIGGPITLNAALYGLLTGIALTTALAGTTLLHAVIDRHQALRAIPPNQRVLATTLAIALNALPAFATAARDAV
EASRLRGLALPRWRQLQIVVAAILYRGIDYSLATAEVLETRSFAARHRARPATQASSLAMLLASFAVIGGSLAGKPSLAL
VGVAGLSLGSALIVHSTWRNLRTLQWSLATGAAASLLLAASTLLVLSLRDSAADLAYSPYPALRWPGFSPLAGFAFLLLA
SPALFLRGSAR

Sequences:

>Translated_331_residues
MNAITWLLWALVLVLAISVTRNPFYLSLAALAVATVWIAVDTARPLGRQAPRLPLLAAGFLLPWSTAVNALLAHIGDRVL
FRLPAWPVIGGPITLNAALYGLLTGIALTTALAGTTLLHAVIDRHQALRAIPPNQRVLATTLAIALNALPAFATAARDAV
EASRLRGLALPRWRQLQIVVAAILYRGIDYSLATAEVLETRSFAARHRARPATQASSLAMLLASFAVIGGSLAGKPSLAL
VGVAGLSLGSALIVHSTWRNLRTLQWSLATGAAASLLLAASTLLVLSLRDSAADLAYSPYPALRWPGFSPLAGFAFLLLA
SPALFLRGSAR
>Mature_331_residues
MNAITWLLWALVLVLAISVTRNPFYLSLAALAVATVWIAVDTARPLGRQAPRLPLLAAGFLLPWSTAVNALLAHIGDRVL
FRLPAWPVIGGPITLNAALYGLLTGIALTTALAGTTLLHAVIDRHQALRAIPPNQRVLATTLAIALNALPAFATAARDAV
EASRLRGLALPRWRQLQIVVAAILYRGIDYSLATAEVLETRSFAARHRARPATQASSLAMLLASFAVIGGSLAGKPSLAL
VGVAGLSLGSALIVHSTWRNLRTLQWSLATGAAASLLLAASTLLVLSLRDSAADLAYSPYPALRWPGFSPLAGFAFLLLA
SPALFLRGSAR

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34854; Mature: 34854

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAITWLLWALVLVLAISVTRNPFYLSLAALAVATVWIAVDTARPLGRQAPRLPLLAAGF
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHH
LLPWSTAVNALLAHIGDRVLFRLPAWPVIGGPITLNAALYGLLTGIALTTALAGTTLLHA
HHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIDRHQALRAIPPNQRVLATTLAIALNALPAFATAARDAVEASRLRGLALPRWRQLQIVV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AAILYRGIDYSLATAEVLETRSFAARHRARPATQASSLAMLLASFAVIGGSLAGKPSLAL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VGVAGLSLGSALIVHSTWRNLRTLQWSLATGAAASLLLAASTLLVLSLRDSAADLAYSPY
EEHHHHHHCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCC
PALRWPGFSPLAGFAFLLLASPALFLRGSAR
CCCCCCCCCHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure
MNAITWLLWALVLVLAISVTRNPFYLSLAALAVATVWIAVDTARPLGRQAPRLPLLAAGF
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHH
LLPWSTAVNALLAHIGDRVLFRLPAWPVIGGPITLNAALYGLLTGIALTTALAGTTLLHA
HHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIDRHQALRAIPPNQRVLATTLAIALNALPAFATAARDAVEASRLRGLALPRWRQLQIVV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AAILYRGIDYSLATAEVLETRSFAARHRARPATQASSLAMLLASFAVIGGSLAGKPSLAL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VGVAGLSLGSALIVHSTWRNLRTLQWSLATGAAASLLLAASTLLVLSLRDSAADLAYSPY
EEHHHHHHCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCC
PALRWPGFSPLAGFAFLLLASPALFLRGSAR
CCCCCCCCCHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA