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The map label for this gene is yisS [H]

Identifier: 221632167

GI number: 221632167

Start: 139413

End: 140465

Strand: Reverse

Name: yisS [H]

Synonym: trd_0133

Alternate gene names: 221632167

Gene position: 140465-139413 (Counterclockwise)

Preceding gene: 221632168

Following gene: 221632166

Centisome position: 7.01

GC content: 59.26

Gene sequence:

>1053_bases
ATGATCGAGAAGGACCGACTCCGACTTGCACTCATCGGGTGCGGGTACTTCGCTCGCTATCACGCTGCCGCCTGGCGCGT
GATTCCGCAGGTCGAACTCGTGGCGGTGTGCGACCGTGCGCCAGAACGAGCGCAGGCGTTTGCCGAGCAATTCGACGTCC
CTCGCTACTACACCAATCCGGAAGCGCTGTTCCGCGCAGAGCGCCTCGATATCGTCGATATCGTGACTACTCCGGAATCC
CATCGCGAACTCGTCGAACTTGCAGCACGTTACGGCGTGCATGTCATTTGCCAGAAACCCATGGCGCTCTCCGAAGCCGA
CTGCGTCGCGATGGTCGAGTCGTGCGAGCGAGCCGGCGTGAGCTTCATGGTTCACGAGAACTTCCGCTGGCAGCGAATAT
TCCGTCGTGCCCGAACGTTGACCGAGGCGATTGGCGAGCCTTTCTTCCTCCGGTTGTGGTTCCGCAGTCACTACGACGTG
TTCGCCAGACAACCGTATTTGGCTACTGCCGAGCGTTTCATCATCCTCGACCTCGGTGTTCACCTACTCGATCTCGCACG
ATTCCTGATGCGAGACGAGTTCTCGACGCTGTATTGCATCACACAGAGAGTCCATCCCCAGATCCGTGGTGAAGACGTGG
CGACGATCCTCCTTCGCTCGCGACGAGGCGCTGCCGCCTCTATCGAACTGAGCTACGCGTCATTTGCACCGCGAGAGCTT
TTCCCACAAACGCTCGCGCTCATCGAGGGCCCCTTGGGAACCGTCCTCGTCGAAGCCGACGGTCTCTTGCGCCTCATTAC
ATCCTCCGGTCATACCGAGGAACGCCTCGCGCCACCCTCCTTGCCCTGGCAGGAGCCTCCTGGTGAATGGATCCAGGAGG
CCGTCCTCGCCATCCAACAACACTTCGTCGATTGTTTGCGACGTGGACTGATGCCAGAGACTCACGGACGAGATAATTTG
CGAACAATGCAATTAGTCTTTGCCGCTTATCGCTCTGCCGACACTACCTCGAGCATCGCCCTCGATCAGTCCGAGTCAGA
AAGGAGGGGCTGA

Upstream 100 bases:

>100_bases
CTCTTCATCCGCTGGCGAGTCCGTCGATGCCAGCGCTTTCTCAAGCGGTTCCACTGCTCGCTCTCCCACCGAATGCGGTC
GTTGTCCTCTGGGGGCGACG

Downstream 100 bases:

>100_bases
CGTGTCCTTCGTTCGCGCCACGTATTATGTGGAAACCCCTCTGACGCTTGAAGCGGCCGCTGAAGCGCTGGCGAGCGAAC
AATCCACAGGCACTTTCATC

Product: putative NADH-dependent dyhydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MIEKDRLRLALIGCGYFARYHAAAWRVIPQVELVAVCDRAPERAQAFAEQFDVPRYYTNPEALFRAERLDIVDIVTTPES
HRELVELAARYGVHVICQKPMALSEADCVAMVESCERAGVSFMVHENFRWQRIFRRARTLTEAIGEPFFLRLWFRSHYDV
FARQPYLATAERFIILDLGVHLLDLARFLMRDEFSTLYCITQRVHPQIRGEDVATILLRSRRGAAASIELSYASFAPREL
FPQTLALIEGPLGTVLVEADGLLRLITSSGHTEERLAPPSLPWQEPPGEWIQEAVLAIQQHFVDCLRRGLMPETHGRDNL
RTMQLVFAAYRSADTTSSIALDQSESERRG

Sequences:

>Translated_350_residues
MIEKDRLRLALIGCGYFARYHAAAWRVIPQVELVAVCDRAPERAQAFAEQFDVPRYYTNPEALFRAERLDIVDIVTTPES
HRELVELAARYGVHVICQKPMALSEADCVAMVESCERAGVSFMVHENFRWQRIFRRARTLTEAIGEPFFLRLWFRSHYDV
FARQPYLATAERFIILDLGVHLLDLARFLMRDEFSTLYCITQRVHPQIRGEDVATILLRSRRGAAASIELSYASFAPREL
FPQTLALIEGPLGTVLVEADGLLRLITSSGHTEERLAPPSLPWQEPPGEWIQEAVLAIQQHFVDCLRRGLMPETHGRDNL
RTMQLVFAAYRSADTTSSIALDQSESERRG
>Mature_350_residues
MIEKDRLRLALIGCGYFARYHAAAWRVIPQVELVAVCDRAPERAQAFAEQFDVPRYYTNPEALFRAERLDIVDIVTTPES
HRELVELAARYGVHVICQKPMALSEADCVAMVESCERAGVSFMVHENFRWQRIFRRARTLTEAIGEPFFLRLWFRSHYDV
FARQPYLATAERFIILDLGVHLLDLARFLMRDEFSTLYCITQRVHPQIRGEDVATILLRSRRGAAASIELSYASFAPREL
FPQTLALIEGPLGTVLVEADGLLRLITSSGHTEERLAPPSLPWQEPPGEWIQEAVLAIQQHFVDCLRRGLMPETHGRDNL
RTMQLVFAAYRSADTTSSIALDQSESERRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=192, Percent_Identity=27.6041666666667, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI87082405, Length=142, Percent_Identity=31.6901408450704, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39975; Mature: 39975

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKDRLRLALIGCGYFARYHAAAWRVIPQVELVAVCDRAPERAQAFAEQFDVPRYYTNP
CCCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCEECCH
EALFRAERLDIVDIVTTPESHRELVELAARYGVHVICQKPMALSEADCVAMVESCERAGV
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
SFMVHENFRWQRIFRRARTLTEAIGEPFFLRLWFRSHYDVFARQPYLATAERFIILDLGV
EEEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHEEEEHHHH
HLLDLARFLMRDEFSTLYCITQRVHPQIRGEDVATILLRSRRGAAASIELSYASFAPREL
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCCHHH
FPQTLALIEGPLGTVLVEADGLLRLITSSGHTEERLAPPSLPWQEPPGEWIQEAVLAIQQ
HHHHHHHHCCCCCEEEECCCCCEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH
HFVDCLRRGLMPETHGRDNLRTMQLVFAAYRSADTTSSIALDQSESERRG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHCCCC
>Mature Secondary Structure
MIEKDRLRLALIGCGYFARYHAAAWRVIPQVELVAVCDRAPERAQAFAEQFDVPRYYTNP
CCCCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCEECCH
EALFRAERLDIVDIVTTPESHRELVELAARYGVHVICQKPMALSEADCVAMVESCERAGV
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
SFMVHENFRWQRIFRRARTLTEAIGEPFFLRLWFRSHYDVFARQPYLATAERFIILDLGV
EEEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHEEEEHHHH
HLLDLARFLMRDEFSTLYCITQRVHPQIRGEDVATILLRSRRGAAASIELSYASFAPREL
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCCHHH
FPQTLALIEGPLGTVLVEADGLLRLITSSGHTEERLAPPSLPWQEPPGEWIQEAVLAIQQ
HHHHHHHHCCCCCEEEECCCCCEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHH
HFVDCLRRGLMPETHGRDNLRTMQLVFAAYRSADTTSSIALDQSESERRG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]