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The map label for this gene is fdhD [H]

Identifier: 22127948

GI number: 22127948

Start: 4525660

End: 4526517

Strand: Direct

Name: fdhD [H]

Synonym: y4079

Alternate gene names: 22127948

Gene position: 4525660-4526517 (Clockwise)

Preceding gene: 22127941

Following gene: 22127949

Centisome position: 98.37

GC content: 53.26

Gene sequence:

>858_bases
GTGATTATGGGTTATAACTTTCAGGACCGCATAGTGAGCCAGATCAAACCTTCGAGATTATCCTCTAGCGCCGAAATCCG
CGGTGCCCGGCAGCTTGACGTGCTACAGCGGCATAAATTGGCAGAACCACAGCAGGATTGGCTGGCGGAAGAAGTACCCG
TTGCATTGGTATACAACGGCATCTCCCATGTGGTGATGATGGCAACCCCTAAAGATTTGGCTGCCTTCGCGCTGGGCTTT
TCGTTATCAGAAGGCATCATTAGCAGCCCACAGGAAATCTATTCTATTGAGATGACCCCCGGCTGCAACGGCATAGAGGT
CAATATTGAGCTATCCAGCCGCCGTTTTGCTGGCCTGAAAGAGCGCCGCCGCGCCATGGCAGGGCGTACCGGGTGCGGAG
TTTGTGGCATTGAACAACTGGACGATATCTTCCGCCCAATCACTCCGCTACCGTTCACCCAGGCATTTAACTTGGAGCAT
TTGGATACCGCCCTTGCCCAGCTAAAACAGGTACAACCGGTCGGTCAACTCACCGGCTGTACCCATGCTGCCGCGTGGAT
TAATCCTGAAGGTGAGTTATTAGGCGGTTGCGAAGATGTAGGTCGCCATGTTGCACTGGATAAGCTACTGGGGATACGAG
CAAAACAGCCGTGGCAACAAGGTGCGGTGCTGGTTTCCAGCCGTGCCAGTTATGAAATGGTGCAAAAAACGGCCATGTGT
GGTGCAGAGATTTTATTTGCCGTCTCCGCCGCCACCACGCTTGCCGTTGAAGTTGCCGAGCGCTGCAATTTGACGTTAGT
CGGTTTCAGTAAACCGGGGCGGGCGACGGTGTATACTCATCCGCAGAGAATAAAATAA

Upstream 100 bases:

>100_bases
TAAAATCGCTCATGCGATATCACGCTTTTTCTGTGTGGAATGAATTTCTATGTTAGATAATACATAGCCGCACCATTCTT
AATGTGAATGTTACCACATT

Downstream 100 bases:

>100_bases
AAGAGATCGATTGATCGACAATCCACACCAAAAAATATCATTGATGACACCAAAGATATAACGATAGTGGCGAGATTGAT
GTCAAATTCTCAGTGACCGA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MIMGYNFQDRIVSQIKPSRLSSSAEIRGARQLDVLQRHKLAEPQQDWLAEEVPVALVYNGISHVVMMATPKDLAAFALGF
SLSEGIISSPQEIYSIEMTPGCNGIEVNIELSSRRFAGLKERRRAMAGRTGCGVCGIEQLDDIFRPITPLPFTQAFNLEH
LDTALAQLKQVQPVGQLTGCTHAAAWINPEGELLGGCEDVGRHVALDKLLGIRAKQPWQQGAVLVSSRASYEMVQKTAMC
GAEILFAVSAATTLAVEVAERCNLTLVGFSKPGRATVYTHPQRIK

Sequences:

>Translated_285_residues
MIMGYNFQDRIVSQIKPSRLSSSAEIRGARQLDVLQRHKLAEPQQDWLAEEVPVALVYNGISHVVMMATPKDLAAFALGF
SLSEGIISSPQEIYSIEMTPGCNGIEVNIELSSRRFAGLKERRRAMAGRTGCGVCGIEQLDDIFRPITPLPFTQAFNLEH
LDTALAQLKQVQPVGQLTGCTHAAAWINPEGELLGGCEDVGRHVALDKLLGIRAKQPWQQGAVLVSSRASYEMVQKTAMC
GAEILFAVSAATTLAVEVAERCNLTLVGFSKPGRATVYTHPQRIK
>Mature_285_residues
MIMGYNFQDRIVSQIKPSRLSSSAEIRGARQLDVLQRHKLAEPQQDWLAEEVPVALVYNGISHVVMMATPKDLAAFALGF
SLSEGIISSPQEIYSIEMTPGCNGIEVNIELSSRRFAGLKERRRAMAGRTGCGVCGIEQLDDIFRPITPLPFTQAFNLEH
LDTALAQLKQVQPVGQLTGCTHAAAWINPEGELLGGCEDVGRHVALDKLLGIRAKQPWQQGAVLVSSRASYEMVQKTAMC
GAEILFAVSAATTLAVEVAERCNLTLVGFSKPGRATVYTHPQRIK

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=267, Percent_Identity=73.7827715355805, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31073; Mature: 31073

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMGYNFQDRIVSQIKPSRLSSSAEIRGARQLDVLQRHKLAEPQQDWLAEEVPVALVYNG
CCCCCCHHHHHHHHCCHHHCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHEEECC
ISHVVMMATPKDLAAFALGFSLSEGIISSPQEIYSIEMTPGCNGIEVNIELSSRRFAGLK
HHCEEEEECCHHHHHHHHHHHHHCHHHCCCCHHEEEEECCCCCEEEEEEEECCCHHCCHH
ERRRAMAGRTGCGVCGIEQLDDIFRPITPLPFTQAFNLEHLDTALAQLKQVQPVGQLTGC
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCC
THAAAWINPEGELLGGCEDVGRHVALDKLLGIRAKQPWQQGAVLVSSRASYEMVQKTAMC
CHHHEEECCCCCEECCHHHHHHHHHHHHHHCCCCCCCHHHCCEEEECCHHHHHHHHHHHH
GAEILFAVSAATTLAVEVAERCNLTLVGFSKPGRATVYTHPQRIK
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure
MIMGYNFQDRIVSQIKPSRLSSSAEIRGARQLDVLQRHKLAEPQQDWLAEEVPVALVYNG
CCCCCCHHHHHHHHCCHHHCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHEEECC
ISHVVMMATPKDLAAFALGFSLSEGIISSPQEIYSIEMTPGCNGIEVNIELSSRRFAGLK
HHCEEEEECCHHHHHHHHHHHHHCHHHCCCCHHEEEEECCCCCEEEEEEEECCCHHCCHH
ERRRAMAGRTGCGVCGIEQLDDIFRPITPLPFTQAFNLEHLDTALAQLKQVQPVGQLTGC
HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCC
THAAAWINPEGELLGGCEDVGRHVALDKLLGIRAKQPWQQGAVLVSSRASYEMVQKTAMC
CHHHEEECCCCCEECCHHHHHHHHHHHHHHCCCCCCCHHHCCEEEECCHHHHHHHHHHHH
GAEILFAVSAATTLAVEVAERCNLTLVGFSKPGRATVYTHPQRIK
HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA