Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 22127941

GI number: 22127941

Start: 4515873

End: 4516337

Strand: Direct

Name: tnpA [H]

Synonym: y4071

Alternate gene names: 22127941

Gene position: 4515873-4516337 (Clockwise)

Preceding gene: 22127939

Following gene: 22127948

Centisome position: 98.16

GC content: 45.16

Gene sequence:

>465_bases
TTGAGCCTAGCACAGCAATGGGGTGGTGGAGAAGTTGCTTCTGCTGACGGTATGCGTTTTGTTACGCCAGTAAAAACGAT
TAACGCCGGACCCAATCGAAAATACTTTGGCTCCAACCGGGGAATTACCTGGTACAACTTTATTTCCGATCAGTTTTCTG
GTTTTCACGGCATTGTTGTACCGGGCACCTTGAGGGACTCAATTTTTATTCTGGAGGGTTTACTCGAACAGCAAACGGGG
TTGAATCCACAGGAAATTATGACTGATACAGCAGGTGCCAGCGATTTGATATTCGGTCTATTCTGGCTGTTGGGATACCC
GTTTTCTCCCCGTCTGGCGGACGCCGGAGATGCCGTTTTCTGGCGAGTGGATAAAAATGCGATAATCAATCCTTCAAATA
TTTATACTTTTGCTGCCAAAGTAGGGTTCAATTTATACAAAAACGCTAATCTGGCAACAATATAG

Upstream 100 bases:

>100_bases
GCTCCGTTTGGGAAACGGAAAATATGGTACGTTAAGGTGATTTTTTGTACTGGGGTTGTACGCCGGAACCGCATGACCCC
TGGTTGATTATCAGGCTACC

Downstream 100 bases:

>100_bases
CTCTCCTCAAGAACCTGTCGCAGAAAACAGGCCGCTATCTCGCAATATATGGCCATTACCCCGGCGGCGGGTGAAACCAC
TGCGGTCAAAGAATTCAAGA

Product: transposase

Products: NA

Alternate protein names: Transposon Tn1000 transposase [H]

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVVPGTLRDSIFILEGLLEQQTG
LNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI

Sequences:

>Translated_154_residues
MSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVVPGTLRDSIFILEGLLEQQTG
LNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI
>Mature_153_residues
SLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVVPGTLRDSIFILEGLLEQQTGL
NPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI

Specific function: Required for transposition of transposon Tn1000 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 16875; Mature: 16744

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVV
CCCCCCCCCCCEECCCCEEEECCCEEECCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEEE
PGTLRDSIFILEGLLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVF
CCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE
WRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI
EEECCCCEECCCHHEEEHHHHCCEEECCCCEECC
>Mature Secondary Structure 
SLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVV
CCCCCCCCCCEECCCCEEEECCCEEECCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEEE
PGTLRDSIFILEGLLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVF
CCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE
WRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI
EEECCCCEECCCHHEEEHHHHCCEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612932; 8080658; 1709493 [H]