| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127450
Identifier: 22127450
GI number: 22127450
Start: 3960098
End: 3960529
Strand: Reverse
Name: 22127450
Synonym: y3576
Alternate gene names: NA
Gene position: 3960529-3960098 (Counterclockwise)
Preceding gene: 22127451
Following gene: 22127449
Centisome position: 86.08
GC content: 37.73
Gene sequence:
>432_bases GTGAGGTTCGCTGATATGTTACTTAGTATTGCTGAAATACAAAAAAAAGTTGATGAGATGGCTTTACGAGCTGGTCTCCC AAGACATTCAGTTAATCTTTGTACCGAACCTATTGGTGAAGGCACTCCATATATTACATTTGAAAACAATATGTATAATT ATATTTATTCAGAAAGAGGTTATGAATTTTCGCGGAGGGTTACTAAGTCGTTAGATGAGTTACTTTATTGGATCATGTCA GAGCTCGCTCATAAGGCAGCATTCCAATATGAGTTAGATCACAGGGTGGAAGGCAGAGATGGACGGCGCATCGCTTTTCC AAAATTTATTGAATTAATGGCGAATATGAATTCAGCATGGGAATCAGAAGCGCGACATGAAATTCAAAAAATTCTGGCTG AATCGCCTTACGACGATAGTCTTTATACATAA
Upstream 100 bases:
>100_bases ATTGCTCCCGCTTTCGGTGAACCAGGTGGTGGTATTCAAATATTACCTAACATGCAAGAACGAGTGAATGTGGAATGGCT TTTAAAGAATAATTATATTC
Downstream 100 bases:
>100_bases AAGCTCATGAATCCCGGCCCTGCCTGAATAGGGTGCGCCGTACCTATAAAGGTAAGTTGTGGGGCATCGCCTGGGGGCCG GAAATGAAGCTGCGCCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRFADMLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSRRVTKSLDELLYWIMS ELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEARHEIQKILAESPYDDSLYT
Sequences:
>Translated_143_residues MRFADMLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSRRVTKSLDELLYWIMS ELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEARHEIQKILAESPYDDSLYT >Mature_143_residues MRFADMLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSRRVTKSLDELLYWIMS ELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEARHEIQKILAESPYDDSLYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16796; Mature: 16796
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFADMLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHCCCC YEFSRRVTKSLDELLYWIMSELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCHHH ESEARHEIQKILAESPYDDSLYT HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRFADMLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHCCCC YEFSRRVTKSLDELLYWIMSELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCHHH ESEARHEIQKILAESPYDDSLYT HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA