| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127448
Identifier: 22127448
GI number: 22127448
Start: 3959082
End: 3959246
Strand: Reverse
Name: 22127448
Synonym: y3574
Alternate gene names: NA
Gene position: 3959246-3959082 (Counterclockwise)
Preceding gene: 22127449
Following gene: 22127443
Centisome position: 86.06
GC content: 58.18
Gene sequence:
>165_bases GTGGGGGCGCGGGTGAATGCCGGTACCATCGATGTGCAGGCGCAGAATATTACTCTCAGCGCGGCCACCGACAGCCTGTC TGTTACCGGTGGATCCTCAAGCAAGCGCCATACCGCGGCGCTGAACCTCTATTGTACTCCTCCCAAATTTCGTCTTGCCG CTTAA
Upstream 100 bases:
>100_bases GGCAACCTTAACCGGCAATATCGTGCTGATGGAGTGACGTCGCCGGGCAAACCGTATTAGTCCCCGTGATCTAAGCGCCA ACGTAGACAATCTGACCGCC
Downstream 100 bases:
>100_bases TAGAGTTCTCTGACTAAAAATCCAGACTATAAAATTAATGGTGAAGTGTTCAATAATATCGATCCTAAAACAAACTCAGT TCGTAATATTTATGACCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MGARVNAGTIDVQAQNITLSAATDSLSVTGGSSSKRHTAALNLYCTPPKFRLAA
Sequences:
>Translated_54_residues MGARVNAGTIDVQAQNITLSAATDSLSVTGGSSSKRHTAALNLYCTPPKFRLAA >Mature_53_residues GARVNAGTIDVQAQNITLSAATDSLSVTGGSSSKRHTAALNLYCTPPKFRLAA
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5534; Mature: 5403
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARVNAGTIDVQAQNITLSAATDSLSVTGGSSSKRHTAALNLYCTPPKFRLAA CCCCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCEEECC >Mature Secondary Structure GARVNAGTIDVQAQNITLSAATDSLSVTGGSSSKRHTAALNLYCTPPKFRLAA CCCCCCCEEEEEECCEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA