| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22126315
Identifier: 22126315
GI number: 22126315
Start: 2694569
End: 2694844
Strand: Direct
Name: 22126315
Synonym: y2431
Alternate gene names: NA
Gene position: 2694569-2694844 (Clockwise)
Preceding gene: 22126313
Following gene: 22126316
Centisome position: 58.57
GC content: 51.81
Gene sequence:
>276_bases ATGAACCGCAACAGCGGCTTGAACATCGACGATATTGATCATATTCGCCAGTCAATCAGTGACATTCTGGCCACACCACA AGGCACACGGGTGATGCGCCGCGATTATGGCTCACTGTTATCAACCTTGATCGACCAGCCGCAAAATCCCGCCTTACGTA TAAAAATGATGGCCGCTGTTTATGGCGCTGTGATGCGTTGGGAGCCGCGCGTTACGCTGGCAGTGGAGATATCACCGGGG CGGTGTAGGGGGTGGAAATTTTTGGGGATTTATTAA
Upstream 100 bases:
>100_bases CATCGCTGGGTGAGCAAGTCATGGTGATCAGTATCGGCGGCGTGCAGCGTGGTGGCGATTGGACTGAGGGGGTTAAATGA CCAGCGATAAATATAGCGGC
Downstream 100 bases:
>100_bases CAATAAAATCGCGGGTGTGCTGCCGCTGTTTGGTAAACGTCACTTTGCTGGCTCGGATTATATCCGTATTCCAGACGTGC CGGGCGGGCTGATTGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein W; Phage Baseplate Assembly Protein W; Bacteriophage P2 Baseplate Assembly Protein GPW; Baseplate Assembly Protein GpW; Phage P2 Baseplate Assembly W Protein; Phage P2 Baseplate Assembly GpW-Like Protein; Pyocin R2_PP Baseplate Protein; Phage-Related Baseplate Protein; Phage Protein Gp; Baseplate Assembly Protein; Prophage Baseplate Protein; Phage Baseplate Assembly; Baseplate Assembly Protein W Prophage; Prophage LambdaW1 Baseplate Assembly Protein W; GpW/GP25 Family Protein
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MNRNSGLNIDDIDHIRQSISDILATPQGTRVMRRDYGSLLSTLIDQPQNPALRIKMMAAVYGAVMRWEPRVTLAVEISPG RCRGWKFLGIY
Sequences:
>Translated_91_residues MNRNSGLNIDDIDHIRQSISDILATPQGTRVMRRDYGSLLSTLIDQPQNPALRIKMMAAVYGAVMRWEPRVTLAVEISPG RCRGWKFLGIY >Mature_91_residues MNRNSGLNIDDIDHIRQSISDILATPQGTRVMRRDYGSLLSTLIDQPQNPALRIKMMAAVYGAVMRWEPRVTLAVEISPG RCRGWKFLGIY
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10317; Mature: 10317
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNSGLNIDDIDHIRQSISDILATPQGTRVMRRDYGSLLSTLIDQPQNPALRIKMMAAV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YGAVMRWEPRVTLAVEISPGRCRGWKFLGIY HHHHHCCCCCEEEEEEECCCCCCCEEEEECC >Mature Secondary Structure MNRNSGLNIDDIDHIRQSISDILATPQGTRVMRRDYGSLLSTLIDQPQNPALRIKMMAAV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH YGAVMRWEPRVTLAVEISPGRCRGWKFLGIY HHHHHCCCCCEEEEEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA