| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126313
Identifier: 22126313
GI number: 22126313
Start: 2694189
End: 2694548
Strand: Direct
Name: 22126313
Synonym: y2429
Alternate gene names: NA
Gene position: 2694189-2694548 (Clockwise)
Preceding gene: 22126307
Following gene: 22126315
Centisome position: 58.56
GC content: 52.22
Gene sequence:
>360_bases ATGCAAGAGATATTAGCATTCATACTTTATTTCATTTCCTTTGTGCCATCCCTCACACAAAACCCATCACATGCCGCGCG CGCCCGTAGGCGGCACACTGGCCGCATGAATATCCTTATTGCTGGCCTTAAACGCCTGTTGGCTAACATTATCCGTATTG GCATCGTCTCAGACGTCGATCTTGCTAACGGATTATGCCGGGTCAAAATGGGCAACCTGAAAACCGATTGGCTTAATTGG TTAACCCTGCGCGCCGGGCGGGTGCGTTTTTGGTCTGCGCCATCGCTGGGTGAGCAAGTCATGGTGATCAGTATCGGCGG CGTGCAGCGTGGTGGCGATTGGACTGAGGGGGTTAAATGA
Upstream 100 bases:
>100_bases CCATCTCAAAGGACAGTTTACGTTCAGCAATATTTTTTTCGTTTTTGATTGGGTCGTAAGATATGTCCATGAAATTAATG TACCCCCAATAAATACATTA
Downstream 100 bases:
>100_bases CCAGCGATAAATATAGCGGCATGAACCGCAACAGCGGCTTGAACATCGACGATATTGATCATATTCGCCAGTCAATCAGT GACATTCTGGCCACACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Protein; Bacteriophage Baseplate Assembly Protein V; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; Phage-Related Baseplate Assembly Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MQEILAFILYFISFVPSLTQNPSHAARARRRHTGRMNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNW LTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWTEGVK
Sequences:
>Translated_119_residues MQEILAFILYFISFVPSLTQNPSHAARARRRHTGRMNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNW LTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWTEGVK >Mature_119_residues MQEILAFILYFISFVPSLTQNPSHAARARRRHTGRMNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNW LTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWTEGVK
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13301; Mature: 13301
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEILAFILYFISFVPSLTQNPSHAARARRRHTGRMNILIAGLKRLLANIIRIGIVSDVD CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH LANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWTEGVK HHCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MQEILAFILYFISFVPSLTQNPSHAARARRRHTGRMNILIAGLKRLLANIIRIGIVSDVD CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH LANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWTEGVK HHCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA