| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yfcZ [H]
Identifier: 22125473
GI number: 22125473
Start: 1744762
End: 1745064
Strand: Direct
Name: yfcZ [H]
Synonym: y1578
Alternate gene names: 22125473
Gene position: 1744762-1745064 (Clockwise)
Preceding gene: 22125471
Following gene: 22125474
Centisome position: 37.92
GC content: 47.52
Gene sequence:
>303_bases TTGACGATGTCAGATGCAATTAATCGTTGTAGTGCGGAAGAAACCGCGGCTTGCTGTTGCGTAGATGTGGGTACAGTGAT GGACAATACGGATCGGACAGCATCCTACAGCTGTGTGTTTGCTAGCCGTCATGAAGCAGAAGCGATGTTGAAAACATTGA CTGATAAAGCACGGGCAGTCGAATCAGACCCATGCCTGATTGAACATAAACTGGAAGATGTCGAGGGCGGTGTTCGTTTG ACTATCGATTTCACCTTTGCCTGCCAGGCAGAAACAATGATTTTCCAACTCGGTCTGCGTTAA
Upstream 100 bases:
>100_bases GTAGTAAAATGGCAACAGAGAAAAATATTTTTGTGCCAGGTCTTATTTGCGCTAGCTAACAGGCAATTTGCACCTATTTT GAAATGTTCGTTGAGGAGAA
Downstream 100 bases:
>100_bases TTTACGTTTCCGAAAGGATCATACATACCTGACCAACGCGAAGCCTTTTGCTTCGCGTTATTACTTTAGATGATGCCCCA CGTTAGTCTATAAACTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MTMSDAINRCSAEETAACCCVDVGTVMDNTDRTASYSCVFASRHEAEAMLKTLTDKARAVESDPCLIEHKLEDVEGGVRL TIDFTFACQAETMIFQLGLR
Sequences:
>Translated_100_residues MTMSDAINRCSAEETAACCCVDVGTVMDNTDRTASYSCVFASRHEAEAMLKTLTDKARAVESDPCLIEHKLEDVEGGVRL TIDFTFACQAETMIFQLGLR >Mature_99_residues TMSDAINRCSAEETAACCCVDVGTVMDNTDRTASYSCVFASRHEAEAMLKTLTDKARAVESDPCLIEHKLEDVEGGVRLT IDFTFACQAETMIFQLGLR
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family [H]
Homologues:
Organism=Escherichia coli, GI87082087, Length=94, Percent_Identity=63.8297872340426, Blast_Score=124, Evalue=1e-30, Organism=Escherichia coli, GI1790357, Length=100, Percent_Identity=41, Blast_Score=79, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005272 [H]
Pfam domain/function: PF04175 DUF406 [H]
EC number: NA
Molecular weight: Translated: 10962; Mature: 10830
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSDAINRCSAEETAACCCVDVGTVMDNTDRTASYSCVFASRHEAEAMLKTLTDKARAV CCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC ESDPCLIEHKLEDVEGGVRLTIDFTFACQAETMIFQLGLR CCCCCEEEECHHCCCCCEEEEEEEEEECCCCEEEEEECCC >Mature Secondary Structure TMSDAINRCSAEETAACCCVDVGTVMDNTDRTASYSCVFASRHEAEAMLKTLTDKARAV CCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC ESDPCLIEHKLEDVEGGVRLTIDFTFACQAETMIFQLGLR CCCCCEEEECHHCCCCCEEEEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]