| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is livK [H]
Identifier: 22124337
GI number: 22124337
Start: 470375
End: 471505
Strand: Direct
Name: livK [H]
Synonym: y0422
Alternate gene names: 22124337
Gene position: 470375-471505 (Clockwise)
Preceding gene: 22124335
Following gene: 22124338
Centisome position: 10.22
GC content: 50.22
Gene sequence:
>1131_bases ATGGGGAATTCGCGGATGAAATTAACAAAAGGTAAAGTGTTGCTGGCTGGGTGTATGGCAATGGCGATGAGTCATTCTGT GCTCGCGCAAGACATTAAGGTCGCTATTGTGGGGGCAATGTCCGGCCCGGTGGCCCAATACGGTGACATGCAATTTACCG GTGCGCGCCAGGCTATCGCCGATATCAACGCTAGCGGTGGTATTAAAGGCGATAAGCTGGTTGGTGTGGAATACGATGAT GCCTGCGATCCGAAACAAGCCGTGGCTGTCGCGAACAAAGTAATAAACGATGGTATCCGTTATGTTATCGGCCATCTGTG CTCTTCTTCAACTCAGCCAGCTTCAGATATTTATGAAGATGAAGGGGTGATAATGATCACCCCTGCTGCTACAAACGCGG ATCTGACCACCCGTGGTTACAAAATGATTATGCGCACCACCGGCCTGGATTCAGACCAGGGCCCTACTGCTGCCAAATAT ATTGTTGAGACGATTAAACCTAAACGTATCGCTGTGGTACATGATAAACAGCAATACGGTGAAGGTCTGGCACGTTCCGT GCGCGACAGTCTGAAAGAACAAGGTGCAGAGGTTGTGCTGTTTGAAGGTGTGACCGCAGGGGATAAAGATTTCTCGACTC TGGTTGCTCGCCTGAAGAAAGAGAACGTCGATTTTGTTTATTTCGGCGGTTACTACCCAGAAATGGGCCAAATTCTGCGT CAGGCTAAGCAAGCAGGCCTAACCGCCCGCTTTATGGGGCCAGAAGGTGTGGGTAACTCCTCACTCTCCAACATCGCGGG TGAGGCCTCTGAAGGCATGCTGGTGACATTACCTAAGCGTTATGATCAGGTTCCGGCGAACCAACCTATTGTTGATGCGC TAAAAGCGAAAAAACTGGATCCAACAGGCCCATTTGTGTGGACCACTTATGCTGCGCTGCAATCACTGACGACGGCGATG GAACGTACTGGCAGCAAAGAACCGGCTGATTTGGCTAACGATCTGAAAACCGGCAAACCGGTTGAGACCGTGATGGGGCC ATTGAGCTGGGACGATAAAGGCGATTTGAAAGGGTTTGAGTTTGGTATTTTTGAATGGCATGCGGATGGTTCCTCTACCG CAGTCAAATAA
Upstream 100 bases:
>100_bases ATAAAGACTTTCAAGGTTAAATCATTATTACTTATGAACAAAATGTTACATTAATGCTAAAACACTCAGACAAACACAAC AAGCATGTTCACAATGACAG
Downstream 100 bases:
>100_bases CAAGAATAGTAGAACTATTGACAAGAATAGTAGAACTATCTCGTTTTAGGATTGCTCTCGCAGTAATCCGGCCCCTTCTA TCAACTGCATCCCCTCGTAT
Product: branched chain amino acid ABC transporter amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: L-BP; LS-BP [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MGNSRMKLTKGKVLLAGCMAMAMSHSVLAQDIKVAIVGAMSGPVAQYGDMQFTGARQAIADINASGGIKGDKLVGVEYDD ACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKY IVETIKPKRIAVVHDKQQYGEGLARSVRDSLKEQGAEVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILR QAKQAGLTARFMGPEGVGNSSLSNIAGEASEGMLVTLPKRYDQVPANQPIVDALKAKKLDPTGPFVWTTYAALQSLTTAM ERTGSKEPADLANDLKTGKPVETVMGPLSWDDKGDLKGFEFGIFEWHADGSSTAVK
Sequences:
>Translated_376_residues MGNSRMKLTKGKVLLAGCMAMAMSHSVLAQDIKVAIVGAMSGPVAQYGDMQFTGARQAIADINASGGIKGDKLVGVEYDD ACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKY IVETIKPKRIAVVHDKQQYGEGLARSVRDSLKEQGAEVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILR QAKQAGLTARFMGPEGVGNSSLSNIAGEASEGMLVTLPKRYDQVPANQPIVDALKAKKLDPTGPFVWTTYAALQSLTTAM ERTGSKEPADLANDLKTGKPVETVMGPLSWDDKGDLKGFEFGIFEWHADGSSTAVK >Mature_375_residues GNSRMKLTKGKVLLAGCMAMAMSHSVLAQDIKVAIVGAMSGPVAQYGDMQFTGARQAIADINASGGIKGDKLVGVEYDDA CDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYI VETIKPKRIAVVHDKQQYGEGLARSVRDSLKEQGAEVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILRQ AKQAGLTARFMGPEGVGNSSLSNIAGEASEGMLVTLPKRYDQVPANQPIVDALKAKKLDPTGPFVWTTYAALQSLTTAME RTGSKEPADLANDLKTGKPVETVMGPLSWDDKGDLKGFEFGIFEWHADGSSTAVK
Specific function: This protein is a component of the leucine-specific transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids in E.coli [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=365, Percent_Identity=75.3424657534247, Blast_Score=596, Evalue=1e-172, Organism=Escherichia coli, GI48994941, Length=367, Percent_Identity=74.6594005449591, Blast_Score=583, Evalue=1e-168,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40176; Mature: 40045
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSRMKLTKGKVLLAGCMAMAMSHSVLAQDIKVAIVGAMSGPVAQYGDMQFTGARQAIA CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHCCCEEECCHHHHHH DINASGGIKGDKLVGVEYDDACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYED HCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC EGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYIVETIKPKRIAVVHDKQQYG CCEEEEECCCCCCCCCHHHHHEEHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHH EGLARSVRDSLKEQGAEVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILR HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH QAKQAGLTARFMGPEGVGNSSLSNIAGEASEGMLVTLPKRYDQVPANQPIVDALKAKKLD HHHHCCCEEEECCCCCCCCCHHHHHCCCCCCCEEEECCHHHCCCCCCCCHHHHHHHCCCC PTGPFVWTTYAALQSLTTAMERTGSKEPADLANDLKTGKPVETVMGPLSWDDKGDLKGFE CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEE FGIFEWHADGSSTAVK EEEEEEECCCCCCCCC >Mature Secondary Structure GNSRMKLTKGKVLLAGCMAMAMSHSVLAQDIKVAIVGAMSGPVAQYGDMQFTGARQAIA CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHCCCEEECCHHHHHH DINASGGIKGDKLVGVEYDDACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYED HCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC EGVIMITPAATNADLTTRGYKMIMRTTGLDSDQGPTAAKYIVETIKPKRIAVVHDKQQYG CCEEEEECCCCCCCCCHHHHHEEHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHH EGLARSVRDSLKEQGAEVVLFEGVTAGDKDFSTLVARLKKENVDFVYFGGYYPEMGQILR HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH QAKQAGLTARFMGPEGVGNSSLSNIAGEASEGMLVTLPKRYDQVPANQPIVDALKAKKLD HHHHCCCEEEECCCCCCCCCHHHHHCCCCCCCEEEECCHHHCCCCCCCCHHHHHHHCCCC PTGPFVWTTYAALQSLTTAMERTGSKEPADLANDLKTGKPVETVMGPLSWDDKGDLKGFE CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEE FGIFEWHADGSSTAVK EEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3891753; 4077929; 2195019; 8041620; 9278503; 6990419; 9298646; 2649683 [H]