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The map label for this gene is pcaC [H]

Identifier: 22124138

GI number: 22124138

Start: 233708

End: 234145

Strand: Reverse

Name: pcaC [H]

Synonym: y0218

Alternate gene names: 22124138

Gene position: 234145-233708 (Counterclockwise)

Preceding gene: 22124139

Following gene: 22124137

Centisome position: 5.09

GC content: 50.68

Gene sequence:

>438_bases
GTGTCGAATAGGGTGGGTTATGAAATCGGAAGGAGGGTGATGATGGTAGCTCAAGATCGTTTTGAACGGGGTTTTCACAA
CCGAAAAGTAGTACTGGGCGCGGAACATGTTGAAACATCATGGGGTAATTCGGATGAATTCAACCGACCGGTGCAAAAAC
TGATCACTGAATATTGCTGGGGAGAGGTCTGGGGGGATCCGGCACTCACTTTTAAAACTCGCAGTATGCTGAATATTGGC
ATTCTCACGGCGATGGGCCAGCATCATGAGCTTTCTTTACACGTTAAAGGCGCGCTGAGAAATGGTGTCACACGCGAGGA
GATACGCGCGGTGTTGCTACAAACCGTGGTGTATTGCGGTGCGCCAGTCGCGCTGGCGGCGTTTCGTATTGCCAGTGCCG
CAATCAAAGCGTATGACGATGAGATTGCTGACAGTTAG

Upstream 100 bases:

>100_bases
TCAGGTTACGCTCAGGGGAAGCGTCAGGGGTAAAAAATTTTGTCTAACCATCCTGTCATACAATCAGACGTTATGTATCA
GACACTCTGTTGTGGCGTGA

Downstream 100 bases:

>100_bases
CACTCCCTTCGCGTCTAATGCCAACTCCACCGGTTGTGGCGATCAATTTGTGGCGATCAATAACATGCCCTCTGCGGTAG
ATTTCAATCTTATATCTCTA

Product: decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSNRVGYEIGRRVMMVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTRSMLNIG
ILTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAAIKAYDDEIADS

Sequences:

>Translated_145_residues
MSNRVGYEIGRRVMMVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTRSMLNIG
ILTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAAIKAYDDEIADS
>Mature_144_residues
SNRVGYEIGRRVMMVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTRSMLNIGI
LTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAAIKAYDDEIADS

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 16234; Mature: 16103

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRVGYEIGRRVMMVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCW
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHH
GEVWGDPALTFKTRSMLNIGILTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCG
HHHCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHCC
APVALAAFRIASAAIKAYDDEIADS
CHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNRVGYEIGRRVMMVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCW
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHH
GEVWGDPALTFKTRSMLNIGILTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCG
HHHCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHCC
APVALAAFRIASAAIKAYDDEIADS
CHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]