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The map label for this gene is tnpA1 [H]

Identifier: 22123965

GI number: 22123965

Start: 56560

End: 56985

Strand: Direct

Name: tnpA1 [H]

Synonym: y0044

Alternate gene names: 22123965

Gene position: 56560-56985 (Clockwise)

Preceding gene: 22123961

Following gene: 22123967

Centisome position: 1.23

GC content: 46.01

Gene sequence:

>426_bases
TTGCACCGTTCGTTACATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACAGGGAAAAACGCAGAGCGATTGG
CAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGGAAGCAGAATACTGTGTGGATCACATCCATATGC
TTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTACCTGAAGGGAAAGAGCAGTCTGATGCTTTATGAG
CAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGAAAAA
CACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATAAAATGGGTGAGCAACTCTCGATCCCGTATCCCG
GTAGCCCGTTTACGGGCCGTAAGTAA

Upstream 100 bases:

>100_bases
TAATTTCCATAACTGTCTCAAAAGTGACCATAAACTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAG
GCGTTGGGTGTGGATCACTA

Downstream 100 bases:

>100_bases
TCCATAGATGCAAATGTCAGATCGCGATGCGCCTGTTAGGGCGCGGCTGGTAACAGAGCCTTATAGGCGCATATGAAAAA
CCTCCGGCTATGCCGGAGGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MHRSLHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYE
QFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK

Sequences:

>Translated_141_residues
MHRSLHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYE
QFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK
>Mature_141_residues
MHRSLHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYE
QFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTGRK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 16861; Mature: 16861

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSLHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPK
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCC
MSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLE
CCHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
EDKMGEQLSIPYPGSPFTGRK
HHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MHRSLHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIHMLLEIPPK
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCC
MSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLE
CCHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHH
EDKMGEQLSIPYPGSPFTGRK
HHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]