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The map label for this gene is 22123961

Identifier: 22123961

GI number: 22123961

Start: 53277

End: 54503

Strand: Direct

Name: 22123961

Synonym: y0040

Alternate gene names: NA

Gene position: 53277-54503 (Clockwise)

Preceding gene: 22123960

Following gene: 22123965

Centisome position: 1.16

GC content: 48.0

Gene sequence:

>1227_bases
ATGTCGTTCGAAAAGTATTTCAGGGACGAGCTGGACTACCTCCGGCAATTAGGACGCGATGCCGCAATAGAACGGCCTCA
TCTCGCTGCATTTTTATCTGAGCAAGGTTCTGATCCGGATGTTGAACGTTTGCTGGAAGGCTTTGCTTTTCTAACGGGCA
ACCTGCGTGAAAAAATCGATGATCAATTCCCTGAATTGACTCATGGTTTACTGAATATGTTGTGGCCGAACTACTTACGG
CCAATACCGAGCATGACCATCATCGAGTACACACCGGATGAAAGTGTGGTCACCGAGGCGACGCTGGTGAAACGGGGTAG
CCAAGTGATGAGTATCCCCATCGCACAAAATGGTCAGCGCAGCGCGTTTATCAACAGTAATGCTCATGCCGGGCCACAAT
GTACTTTTACGTTGTGCCGTGATGTGTGGTTGTTCCCCATGTCCATCCGGGAGATCTCGGCGAACAGCAGTAACGAACAA
GGCATTTTGAGTATTCACTTTGCCGCCAAAGCGGAATTGAACTTACAAGACCTGCAATTGGATAAATTGCGCTTTTATCT
GGGCGAAGACAACTACACCAGCACACAACTCTATTTCTGGATTAACCACTATTTCGAACGCGCTGAACTGGTTGTCAACG
GGATAACCATCCCGATGCCTGATTTTGACTTTAACCCAGTGGGCTTTGAACGCGATGATGCCCTCTTGCCGTACCCGAAA
AACGCCTATATGGGTTACCGGATCCTGCAAGAATATTTTTGCTTCCCCGAAGGCTTTTTGTTCTTTGATGTCAATGGTGT
GGTCGATTTTCCGCCGCACTTGAATGCCAGTGAATTCTCTCTGAATTTGTATTTCTCTCAGGCATTGCCGCCTGAAGTGA
AAGTCCGCTCCACCACACTGCGGATGAATTGCACACCTGCGGTGAACCTGTTCCAACATGACAGTGAAGCGATTGATCTT
GATGGAACCCAGACGGAATATCCGCTCTGTGTCAGCTACCATAATCCGGATCACTACGACATCTTTTCAGTTGATCGGGT
TGACAGTTGGCTCAGTGAAAAAGGTGTTCCTAAGGGGCGCGGCCGTGCACTGAACCCCAAAACTTGGACATCTGCTTTAC
TGCTTTTCTACCTGAGTCCGGTATTCTGCCGGACTCATTCCGCCTGTTTTCAGGCTAATGCGCTCTGTATTGTAATAATG
GATATATTCTACAATGTCACGCTTTAA

Upstream 100 bases:

>100_bases
ATATTAGCGCTCGTGTTAATTTCGACGATATGGGTGATGTCGTTGAGTTCAACATTCAGTTAGACAATAACCGCCGTTAC
TGCTTTAACCAGGAAACATA

Downstream 100 bases:

>100_bases
AACTGTGGCTGAATCGTACTTCTTACGGTGATACATCTCGGCTTTCAGGTGACTGAAGAAATTTTCCATCACTGCATTAT
CTAAACAATTGCCTTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Protein ImpG/VasA; Type VI Secretion

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLR
PIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQ
GILSIHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPEVKVRSTTLRMNCTPAVNLFQHDSEAIDL
DGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGVPKGRGRALNPKTWTSALLLFYLSPVFCRTHSACFQANALCIVIM
DIFYNVTL

Sequences:

>Translated_408_residues
MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLR
PIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQ
GILSIHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPEVKVRSTTLRMNCTPAVNLFQHDSEAIDL
DGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGVPKGRGRALNPKTWTSALLLFYLSPVFCRTHSACFQANALCIVIM
DIFYNVTL
>Mature_407_residues
SFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLRP
IPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQG
ILSIHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPKN
AYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPEVKVRSTTLRMNCTPAVNLFQHDSEAIDLD
GTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGVPKGRGRALNPKTWTSALLLFYLSPVFCRTHSACFQANALCIVIMD
IFYNVTL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46728; Mature: 46597

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKID
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
DQFPELTHGLLNMLWPNYLRPIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQR
HHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCC
SAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQGILSIHFAAKAELNLQDLQL
CEEECCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCEEEEEEEEEECCCHHHCEE
DKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
EEEEEEECCCCCCCEEEEEHHHHHHHHHHEEEECEEECCCCCCCCCCCCCCCCCCCCCCC
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPEVKVRSTTL
CCHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEEE
RMNCTPAVNLFQHDSEAIDLDGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGVPKGR
EEECCCHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCC
GRALNPKTWTSALLLFYLSPVFCRTHSACFQANALCIVIMDIFYNVTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCC
>Mature Secondary Structure 
SFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKID
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
DQFPELTHGLLNMLWPNYLRPIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQR
HHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCC
SAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQGILSIHFAAKAELNLQDLQL
CEEECCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCCCEEEEEEEEEECCCHHHCEE
DKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK
EEEEEEECCCCCCCEEEEEHHHHHHHHHHEEEECEEECCCCCCCCCCCCCCCCCCCCCCC
NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPEVKVRSTTL
CCHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEEE
RMNCTPAVNLFQHDSEAIDLDGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGVPKGR
EEECCCHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCC
GRALNPKTWTSALLLFYLSPVFCRTHSACFQANALCIVIMDIFYNVTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA