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The map label for this gene is lipO [H]

Identifier: 221232533

GI number: 221232533

Start: 1754789

End: 1756405

Strand: Reverse

Name: lipO [H]

Synonym: SPN23F_18070

Alternate gene names: 221232533

Gene position: 1756405-1754789 (Counterclockwise)

Preceding gene: 221232534

Following gene: 221232532

Centisome position: 79.07

GC content: 37.11

Gene sequence:

>1617_bases
ATGAAATTCAAAACATTCTCAAAATCAGCAGTTTTGTTGACAGCTAGTTTAGCAGTACTTGCAGCCTGTGGCTCAAAAAA
TACAGCTTCAAGTCCAGATTATAAGTTGGAAGGTGTAACATTCCCGCTTCAAGAAAAGAAAACATTGAAGTTTATGACAG
CCAGTTCACCGTTATCTCCTAAAGACCCAAATGAAAAGTTAATTTTGCAACGTTTGGAGAAGGAAACTGGCGTTCATATT
GACTGGACCAACTACCAATCCGACTTTGCAGAAAAACGTAACTTGGATATTTCTAGTGGTGATTTACCAGATGCTATCCA
CAACGACGGAGCTTCAGATGTGGACTTGATGAACTGGGCTAAAAAAGGTGTTATTATTCCAGTTGAAAATTTGATTGATA
AATACATGCCAAATCTTAAGAAAATTTTGGATGAGAAACCAGAGTACAAGGCCTTGATGACAGCACCTGATGGGCACATT
TACTCATTCCCATGGATTGAAGAGCTTGGAGATGGTAAAGAGTCTATTCACAGCGTCAACGATATGGCTTGGATTAACAA
AGATTGGCTTAAGAAACTTGGTCTTGAAATGCCAAAAACTACTGATGATTTGATTAAAGTCCTAGAAGCTTTCAAAAACG
GGGATCCAAATGGAAATGGAGAGGCTGATGAAATTCCATTTTCATTTATTAGTGGTAACGGAAACGAAGATTTTAAATTC
CTATTTGCTGCATTTGGTATAGGGGATAACGATGATCATTTAGTAGTAGGAAATGATGGCAAAGTTGATTTCACAGCAGA
TAACGATAACTATAAAGAAGGTGTCAAATTTATCCGTCAATTGCAAGAAAAAGGCTTGATTGATAAAGAAGCTTTCGAAC
ATGATTGGAATAGTTACATTGCTAAAGGTCATGATCAGAAATTTGGTGTTTACTTTACATGGGATAAGAATAATGTTACT
GGAAGTAACGAAAGTTATGATGTTTTACCAGTACTTGCTGGACCAAGTGGTCAAAAACACGTAGCTCGTACAAACGGTAT
GGGATTTGCACGTGACAAGATGGTTATTACCAGTGTAAACAAAAACCTAGAATTGACAGCTAAATGGATTGATGCACAAT
ACGCTCCACTCCAATCTGTGCAAAATAACTGGGGAACTTACGGAGATGACAAACAACAAAACATTTTTGAATTGGATCAA
GCGTCAAATAGTCTAAAACACTTACCACTAAACGGAACTGCACCAGCAGAACTTCGTCAAAAGACTGAAGTAGGAGGACC
ACTAGCTATTCTAGATTCATACTATGGTAAAGTAACAACCATGCCTGATGATGCCAAATGGCGTTTGGATCTTATCAAAG
AATATTATGTTCCTTACATGAGCAATGACAATAACTATCCAAGAGTCTTTATGACACAGGAAGATTTGGACAAGATTGCC
CATATCGAAGCAGATATGAATGACTATATCTACCGTAAACGTGCTGAATGGATTGTAAATGGCAATATTGATACTGAGTG
GGATGATTACAAGAAAGAACTTGAAAAATACGGACTTTCTGATTACCTCGCTATTAAACAAAAATACTACGATCAATACC
AAGCAAACAAAAACTAG

Upstream 100 bases:

>100_bases
TTGATTGTTATGTATCCATTCTTCCAAAAATACTTTGATAAAGGAATTATGGCTGGTTCACTTAAAGGATAAAAAAAGAA
AAAATAAAAGGAGTTTTCTC

Downstream 100 bases:

>100_bases
AGGTTGATTATGGGAGATAAGAAATACACAGTAGAAAAAGCCAATCGTTTTATAGCAGAAAATAAACATCTCGTTAATAC
TCAATATAAGCCTGAAGAAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Lipoprotein lplA [H]

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSPKDPNEKLILQRLEKETGVHI
DWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWAKKGVIIPVENLIDKYMPNLKKILDEKPEYKALMTAPDGHI
YSFPWIEELGDGKESIHSVNDMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKF
LFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYIAKGHDQKFGVYFTWDKNNVT
GSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVNKNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQ
ASNSLKHLPLNGTAPAELRQKTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNDNNYPRVFMTQEDLDKIA
HIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN

Sequences:

>Translated_538_residues
MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSPKDPNEKLILQRLEKETGVHI
DWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWAKKGVIIPVENLIDKYMPNLKKILDEKPEYKALMTAPDGHI
YSFPWIEELGDGKESIHSVNDMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKF
LFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYIAKGHDQKFGVYFTWDKNNVT
GSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVNKNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQ
ASNSLKHLPLNGTAPAELRQKTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNDNNYPRVFMTQEDLDKIA
HIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN
>Mature_538_residues
MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSPKDPNEKLILQRLEKETGVHI
DWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWAKKGVIIPVENLIDKYMPNLKKILDEKPEYKALMTAPDGHI
YSFPWIEELGDGKESIHSVNDMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKF
LFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYIAKGHDQKFGVYFTWDKNNVT
GSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVNKNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQ
ASNSLKHLPLNGTAPAELRQKTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNDNNYPRVFMTQEDLDKIA
HIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 61007; Mature: 61007

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00268 CECROPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCEEEEEECCCCCCC
KDPNEKLILQRLEKETGVHIDWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWA
CCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHH
KKGVIIPVENLIDKYMPNLKKILDEKPEYKALMTAPDGHIYSFPWIEELGDGKESIHSVN
HCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHCCCHHHHHHHH
DMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKF
HHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEE
LFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYI
EEEEECCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AKGHDQKFGVYFTWDKNNVTGSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVN
HCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECC
KNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQASNSLKHLPLNGTAPAELRQ
CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHH
KTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNDNNYPRVFMTQEDLDKIA
HHHCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCEECCCCCCCEEEEEHHHHHHHH
HIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN
HHHCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFKTFSKSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCEEEEEECCCCCCC
KDPNEKLILQRLEKETGVHIDWTNYQSDFAEKRNLDISSGDLPDAIHNDGASDVDLMNWA
CCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHH
KKGVIIPVENLIDKYMPNLKKILDEKPEYKALMTAPDGHIYSFPWIEELGDGKESIHSVN
HCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHCCCHHHHHHHH
DMAWINKDWLKKLGLEMPKTTDDLIKVLEAFKNGDPNGNGEADEIPFSFISGNGNEDFKF
HHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEE
LFAAFGIGDNDDHLVVGNDGKVDFTADNDNYKEGVKFIRQLQEKGLIDKEAFEHDWNSYI
EEEEECCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AKGHDQKFGVYFTWDKNNVTGSNESYDVLPVLAGPSGQKHVARTNGMGFARDKMVITSVN
HCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECC
KNLELTAKWIDAQYAPLQSVQNNWGTYGDDKQQNIFELDQASNSLKHLPLNGTAPAELRQ
CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHH
KTEVGGPLAILDSYYGKVTTMPDDAKWRLDLIKEYYVPYMSNDNNYPRVFMTQEDLDKIA
HHHCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCEECCCCCCCEEEEEHHHHHHHH
HIEADMNDYIYRKRAEWIVNGNIDTEWDDYKKELEKYGLSDYLAIKQKYYDQYQANKN
HHHCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7921237; 9384377 [H]