Click here to switch to the map view.

The map label for this gene is 221232269

Identifier: 221232269

GI number: 221232269

Start: 1482210

End: 1483058

Strand: Reverse

Name: 221232269

Synonym: SPN23F_15230

Alternate gene names: NA

Gene position: 1483058-1482210 (Counterclockwise)

Preceding gene: 221232270

Following gene: 221232268

Centisome position: 66.76

GC content: 41.58

Gene sequence:

>849_bases
ATGAAATTAGCTGTTTTCACAGATTCCTCTGCTTATCTCAGTGAAGAGACCTTGCAAAGAGAAGACTTGTTTGTCTTGGA
TATTCCTGTCAATATTGATGGTGAGGAATATGTCGAAGGCATCAATCTGTCTGCTGAGGAATTTTACCAAAAAATGGCTC
AGGCTTCTGAATTGCCTAAGACCAGTCAACCAAGTATTGCCAAGTTAGATGAAATCTTAACTTCGCTCAAAGAACAAGGC
TATACACATGCCTTGGGGCTTTTCCTATCTTCTGGAATTTCAGGTTTTTACCAAAATATCCAGTATATGGTCGATGACTA
TGAGGGCTTAACCATTGCTTTCCCAGACACTTTGATTACAAGTGCTCCCCTAGGCATCATGGTTGAAAGCGTCTTTAATT
GGCGTGATCAGGGCGATGATTTTGCCAGCATTCAGGATAAGCTAGCCATTCAAATCAGCCGTACGTCAGCCTTTATCATG
GTAGATGACTTGGATCATTTGGTAAAAGGTGGACGCCTTTCAAATGGGGCTGCCATTTTGGGCAATTTGCTTAGCATTAA
GCCAATCCTTTATTTTAACGATCAAGGTGTGATTGAAGTTTACGAAAAAGTTCGTACTGAAAAGAAGGCCACCAAACGCT
TAATTGAAATTATCAAGGAAACAACGGCTTCAGGTCAATACCGGGTCATTGTCATTCATGGGAATGCTCCTGAAAAGGCT
GAAGAATTGCGTCAGCATTTGCTTGATTTTGGCTTGGGTTCGGATGTTTCACTTGCTACATTTGGTAGTGTCATTGGAAC
GCACCTAGGAGCAGGAAGTATTGCTCTGGGTTATATTCCAGTGATTTAG

Upstream 100 bases:

>100_bases
GAAACCTTGGCTCGTCCATGTTTGAACATGCTCAATCGTTTGACTTACGAAGTGACTGAAATTGCATTAGACTTACCAGG
AATTAATTTGGAGTTCTAAT

Downstream 100 bases:

>100_bases
TTGGCACTTCTAGGCTAGTTAATCTTAGAAATTGAACACGGACTACCTGCCTCTTGAAAAAAGATGCCTGTCTTGCCTTT
CGTGGAAAGTCAGTGCCATT

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKLAVFTDSSAYLSEETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPKTSQPSIAKLDEILTSLKEQG
YTHALGLFLSSGISGFYQNIQYMVDDYEGLTIAFPDTLITSAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIM
VDDLDHLVKGGRLSNGAAILGNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI

Sequences:

>Translated_282_residues
MKLAVFTDSSAYLSEETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPKTSQPSIAKLDEILTSLKEQG
YTHALGLFLSSGISGFYQNIQYMVDDYEGLTIAFPDTLITSAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIM
VDDLDHLVKGGRLSNGAAILGNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI
>Mature_282_residues
MKLAVFTDSSAYLSEETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPKTSQPSIAKLDEILTSLKEQG
YTHALGLFLSSGISGFYQNIQYMVDDYEGLTIAFPDTLITSAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIM
VDDLDHLVKGGRLSNGAAILGNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30976; Mature: 30976

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVFTDSSAYLSEETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPK
CEEEEEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC
TSQPSIAKLDEILTSLKEQGYTHALGLFLSSGISGFYQNIQYMVDDYEGLTIAFPDTLIT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH
SAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIMVDDLDHLVKGGRLSNGAAIL
CCCHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCEEEEEEECHHHHHCCCCCCCCHHHH
GNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
HHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECEEECC
>Mature Secondary Structure
MKLAVFTDSSAYLSEETLQREDLFVLDIPVNIDGEEYVEGINLSAEEFYQKMAQASELPK
CEEEEEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC
TSQPSIAKLDEILTSLKEQGYTHALGLFLSSGISGFYQNIQYMVDDYEGLTIAFPDTLIT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH
SAPLGIMVESVFNWRDQGDDFASIQDKLAIQISRTSAFIMVDDLDHLVKGGRLSNGAAIL
CCCHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCEEEEEEECHHHHHCCCCCCCCHHHH
GNLLSIKPILYFNDQGVIEVYEKVRTEKKATKRLIEIIKETTASGQYRVIVIHGNAPEKA
HHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH
EELRQHLLDFGLGSDVSLATFGSVIGTHLGAGSIALGYIPVI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]