| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is msrA
Identifier: 221230905
GI number: 221230905
Start: 3166734
End: 3167267
Strand: Direct
Name: msrA
Synonym: MLBr_02647
Alternate gene names: 221230905
Gene position: 3166734-3167267 (Clockwise)
Preceding gene: 221230896
Following gene: 221230907
Centisome position: 96.9
GC content: 56.74
Gene sequence:
>534_bases ATGGCAAGGACAAACACCCGAAAAGCGATCCTCGCCGGCGGCTGTTTCTGGGGAATCCAAAATTTGTTCCGCCGACAACC CGGTGTGATATCGACCCGGGTTGGCTATACTGGCGGCGGCACACCCAACGCGACATACCGTAATCACGGCATGCACGCCG AGGCGGTCGAAATCATCTATGACCCAGCGATCACTGATTATCGCACACTATTGGAATTTTTCTTCCAAATCCACGATCCG ACAACACGAAATCGGCAAGGAAACGACCAGGGTACCAGCTACCGGTCGGCCATCTTCTACCTCGACGACGAACAAAAGAA AGTTGCGCTGGACACCATAGCCGCCGTCGAGGCTTCCAGCCTATGGCCTGGCAAAGTAGTGACCGAGGTCAGCCTCGCTG AGGACTTCTGGGAGGCCGAGCCTGAGCACCAGGATTACCTGCAGCACTATCCCAACGGGTACACCTGCCACTTCGTTCGT CCCAACTGGAAGTTGCCACGACGAGCCCCCGCAGACGCAAAAGCCGACAGCTGA
Upstream 100 bases:
>100_bases TTTCCGAATGCCGTTACATCTCATTCGTCTGAGTGTAACCTGGCTAGGGACCGTCATCGGCCCCAGGCACCATCGCTGGT AAAGCCAACAGGGAGAGTCA
Downstream 100 bases:
>100_bases TCGGCTAGGACCCCAGGCGGTCAGCGTTGACGCAGGATCCACTCGCCCGCCATTTCTTGGGGTGTAGACTACCCCGCGCA AGTGCTATCGTTCACCAGGC
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MARTNTRKAILAGGCFWGIQNLFRRQPGVISTRVGYTGGGTPNATYRNHGMHAEAVEIIYDPAITDYRTLLEFFFQIHDP TTRNRQGNDQGTSYRSAIFYLDDEQKKVALDTIAAVEASSLWPGKVVTEVSLAEDFWEAEPEHQDYLQHYPNGYTCHFVR PNWKLPRRAPADAKADS
Sequences:
>Translated_177_residues MARTNTRKAILAGGCFWGIQNLFRRQPGVISTRVGYTGGGTPNATYRNHGMHAEAVEIIYDPAITDYRTLLEFFFQIHDP TTRNRQGNDQGTSYRSAIFYLDDEQKKVALDTIAAVEASSLWPGKVVTEVSLAEDFWEAEPEHQDYLQHYPNGYTCHFVR PNWKLPRRAPADAKADS >Mature_176_residues ARTNTRKAILAGGCFWGIQNLFRRQPGVISTRVGYTGGGTPNATYRNHGMHAEAVEIIYDPAITDYRTLLEFFFQIHDPT TRNRQGNDQGTSYRSAIFYLDDEQKKVALDTIAAVEASSLWPGKVVTEVSLAEDFWEAEPEHQDYLQHYPNGYTCHFVRP NWKLPRRAPADAKADS
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family
Homologues:
Organism=Homo sapiens, GI6912516, Length=155, Percent_Identity=40, Blast_Score=111, Evalue=3e-25, Organism=Homo sapiens, GI208609995, Length=155, Percent_Identity=40, Blast_Score=111, Evalue=3e-25, Organism=Homo sapiens, GI208609993, Length=117, Percent_Identity=39.3162393162393, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI1790665, Length=150, Percent_Identity=47.3333333333333, Blast_Score=132, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17533973, Length=139, Percent_Identity=37.410071942446, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6320881, Length=166, Percent_Identity=35.5421686746988, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI24664627, Length=141, Percent_Identity=38.2978723404255, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI45553131, Length=136, Percent_Identity=38.9705882352941, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24664631, Length=141, Percent_Identity=36.8794326241135, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSRA_MYCLB (B8ZTJ5)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002504321.1 - ProteinModelPortal: B8ZTJ5 - SMR: B8ZTJ5 - EnsemblBacteria: EBMYCT00000086164 - GeneID: 7327123 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000017224 - HOGENOM: HBG748152 - OMA: VPNATYR - ProtClustDB: PRK14054 - HAMAP: MF_01401 - InterPro: IPR002569 - Gene3D: G3DSA:3.30.1060.10 - TIGRFAMs: TIGR00401
Pfam domain/function: PF01625 PMSR; SSF55068 MsrA
EC number: =1.8.4.11
Molecular weight: Translated: 20055; Mature: 19923
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: ACT_SITE 15-15
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTNTRKAILAGGCFWGIQNLFRRQPGVISTRVGYTGGGTPNATYRNHGMHAEAVEIIY CCCCCCCEEEEECHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHEEEEE DPAITDYRTLLEFFFQIHDPTTRNRQGNDQGTSYRSAIFYLDDEQKKVALDTIAAVEASS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCC LWPGKVVTEVSLAEDFWEAEPEHQDYLQHYPNGYTCHFVRPNWKLPRRAPADAKADS CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARTNTRKAILAGGCFWGIQNLFRRQPGVISTRVGYTGGGTPNATYRNHGMHAEAVEIIY CCCCCCEEEEECHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHEEEEE DPAITDYRTLLEFFFQIHDPTTRNRQGNDQGTSYRSAIFYLDDEQKKVALDTIAAVEASS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCC LWPGKVVTEVSLAEDFWEAEPEHQDYLQHYPNGYTCHFVRPNWKLPRRAPADAKADS CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA