| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is yjgF [C]
Identifier: 221230713
GI number: 221230713
Start: 2728381
End: 2728905
Strand: Reverse
Name: yjgF [C]
Synonym: MLBr_02304
Alternate gene names: 221230713
Gene position: 2728905-2728381 (Counterclockwise)
Preceding gene: 221230716
Following gene: 221230712
Centisome position: 83.5
GC content: 60.57
Gene sequence:
>525_bases TTGGGAGTTAGTGGCGGTGCTGCCCGGCCCCACGGGCGAGCAGCATGTTGCATACTTGAAGCGTCCGAAATGAGCGTTTT AGCCCGGCTTGGACAACTAGGTATCGAGCTTCCGCAAGCGGCGCCGCCGTTGGCTTCCTATGTTTCGGCGGTGCGCACCG GTAACTTGGTATACACCTCGGGCCAGCTGCCAATCGAGGACGGGCGGTTGCCCCAGACCGGTAAGGTCGGTGCCGATGTC AGCCTAGGCGAAGGCAAGGCGTTGGCGCGGATTTGCGCGCTCAACGCGTTGGCGGCTGTGGATTCCTTGGTGGGTCTCGA CTCGGTGACCGGGGTGGTCAAGGTCGTTGGATTCGTTGCCTCCAGTTCAGGCTTCAATGGCCAGCCGAGCGTCGTGAATG GAGCATCCGACTTGTTCGCTGAGGTATTCGGTGATAGAGGTAGGCATGCGCGTTCGGCAGTCGGTGTGGCAGAGCTACCG CTGGGTGCACCAGTGGAAATTGAGTTGATCGTGGAACTAGGCTAG
Upstream 100 bases:
>100_bases AAGCTCGCATCATGAGCCAAACTACCGCATGGGAGTATGTCACGGTTCCTCTGCTGACGCACGCCACCAAACAAATCCTC GATCAATGGGGCGCCGATAG
Downstream 100 bases:
>100_bases CTTCCGTGGCCGAGGTGGTCAAGTGGCTAGCCCATCCCGCATACGGCCGGCTGCGGGCGGTCACCGACACAGCGTCGGTT CTGTTGGCTGATAACCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Transcriptional Regulator; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGVSGGAARPHGRAACCILEASEMSVLARLGQLGIELPQAAPPLASYVSAVRTGNLVYTSGQLPIEDGRLPQTGKVGADV SLGEGKALARICALNALAAVDSLVGLDSVTGVVKVVGFVASSSGFNGQPSVVNGASDLFAEVFGDRGRHARSAVGVAELP LGAPVEIELIVELG
Sequences:
>Translated_174_residues MGVSGGAARPHGRAACCILEASEMSVLARLGQLGIELPQAAPPLASYVSAVRTGNLVYTSGQLPIEDGRLPQTGKVGADV SLGEGKALARICALNALAAVDSLVGLDSVTGVVKVVGFVASSSGFNGQPSVVNGASDLFAEVFGDRGRHARSAVGVAELP LGAPVEIELIVELG >Mature_173_residues GVSGGAARPHGRAACCILEASEMSVLARLGQLGIELPQAAPPLASYVSAVRTGNLVYTSGQLPIEDGRLPQTGKVGADVS LGEGKALARICALNALAAVDSLVGLDSVTGVVKVVGFVASSSGFNGQPSVVNGASDLFAEVFGDRGRHARSAVGVAELPL GAPVEIELIVELG
Specific function: Unknown
COG id: COG0251
COG function: function code J; Putative translation initiation inhibitor, yjgF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17431; Mature: 17300
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSGGAARPHGRAACCILEASEMSVLARLGQLGIELPQAAPPLASYVSAVRTGNLVYTS CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEC GQLPIEDGRLPQTGKVGADVSLGEGKALARICALNALAAVDSLVGLDSVTGVVKVVGFVA CCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSSGFNGQPSVVNGASDLFAEVFGDRGRHARSAVGVAELPLGAPVEIELIVELG CCCCCCCCCCEECCHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCEEEEEEEEEC >Mature Secondary Structure GVSGGAARPHGRAACCILEASEMSVLARLGQLGIELPQAAPPLASYVSAVRTGNLVYTS CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEC GQLPIEDGRLPQTGKVGADVSLGEGKALARICALNALAAVDSLVGLDSVTGVVKVVGFVA CCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSSGFNGQPSVVNGASDLFAEVFGDRGRHARSAVGVAELPLGAPVEIELIVELG CCCCCCCCCCEECCHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA