Definition Mycobacterium leprae Br4923 chromosome, complete genome.
Accession NC_011896
Length 3,268,071

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The map label for this gene is cpsY

Identifier: 221230663

GI number: 221230663

Start: 2624249

End: 2625877

Strand: Direct

Name: cpsY

Synonym: MLBr_02209

Alternate gene names: 221230663

Gene position: 2624249-2625877 (Clockwise)

Preceding gene: 221230659

Following gene: 221230671

Centisome position: 80.3

GC content: 55.0

Gene sequence:

>1629_bases
ATGAGCAAGATTGTTTCATGCGAAGACGATCGGCCCGTGCGGCGCACCCTTGAACCCATCATTGTTACCCGGCAGGGAAA
GGTTGCCCGGCTCGAGTCCAGTTTGACCCCGCACGAAGCACAGATCGAAGATTTGATCTTTCTGCGAAAGGCGTTGAACC
GGGCTGATATTCCTTTCCTATTTATCCGCAACCACAAAAACCGGCCCGTTCTTGCCATCAACATCAAACTGCGCCCCGCG
GTCGAACGCGCGCTCGTCACCGCGTGTGCCAGCGAACCTATGTACGCCAAAACAATAGACGAACGCGGGCTTTCTCCCGT
GCTAGTGGCCAAAGGTCAATTATCGCAGTCGATCGATCCACGCATCGTGCGGTTGTATCGACGAAGGATTGCACCGGGAG
GATTTCGGTTCGGTTCGAGGTTCGGTGTCGAACTGCAGTTCTGGTCCTTCGAGGAGACCCTGATCCGCTGCCCGGTGGAA
AACTCCCTGACCCGCAAAGTGCTACCACGCAAAGAAGTAACACCGGCTACCATCAAGCTCTACGGGTACAAATGGCATAC
CATTGAGGGGATGTTCACCCCGCACGCGAGTGACGTCACGTTTGACATCGATCTGGTGTTCTCGTGGGTCGACGGTAGTG
ATCCAGAATTTCGAGCACGTCGGGCAGCCGAAATGTCGCACCACGTAGTAGGTGAAGGCGACGACGCCGACGCGCGGATC
CGACAGATCGACGAGTTGAAATACGCCTTGCGGTCGGTGAACATGTTTGCTCCATGGATCCGGCGCATCTTCATCGCGAC
AGATTCGATCCCGCCGTCATGGTTAGCCGATCACCCAATGATCACAATTGTCCCCGCGGAGGACCATTTTTCAGATAGGT
CGGCATTGCCAACCTACAACTCACACGCGGTGGAAAGCCAGCTACACCGGATACCCGACCTCAGCGAGCATTTCCTGTAC
TCCAATGACGACATGTTTTTCGGTCGCCCACTCAAAGCAAGCATGTTCTTCTCCCCGGGCGGAGTGACCAGGTTCATCGA
AGCCAAGACCCGTATAGGATTAGGCACTAACGATCCAACGCGCAGTGGCTTCGAGAATGCGGCCCGGGTTAACCGCCAAC
TCCTCTTACGGCGATTTGGACAACTGATTACGCGTCATCTAGAACACACCACGGTTCCGCTACGCAAGAGCGTGCTGTTC
GAGATGGAACAAGAATTCCCGGAAGAATTCGCTCGGACCCAGGAAAGTGTGTTCCGGTCCGGAACAGATATATCTGTTAC
CAATTCGCTCTACCATTACTACGCGCTGATAACTGGACGCGCTGTCCAACAAGAAAAAGCCAAAGTTCTGTACGTGGACA
CCACTTCGTACACAGGCCTCAACTTACTTCCCGAACTGCGGAAACGTCGCAACTACGACTTTTTCTGCCTCAACGACGGT
AGTTTCCCCGAAGTCCCCGCAACGGAGCGTGCCGAACGGGTCGTCAGTTTTCTGGAACGCTACTTTCCAATACCGGCACC
CTGGGAAAAGGTCGCCACGGACTTCAATCGCCAAGACTTTGCGTCACCGACGGTGTCAGCACCATTGGAGGATGGGCAAA
CAGCGAATCCCGCCCAGACGGCTCGATAA

Upstream 100 bases:

>100_bases
TTGCCTGCGTATCCCCAGAATACCTAGTCCTGCGCCGATGTGTGGTCTGTGAGATTCCCTCGGTGCCGTGGTTAGACTAT
TTCACTAAGGCGGTGTTTCG

Downstream 100 bases:

>100_bases
ACAGCCCGCTTTCGGCGATATCGCGTCGCGCCTGCGCAGGAGAAACAAAGGTGCCCACCATGTTTCCGATCCCAAGTGGA
ATAACAGAGTGCACCACTGT

Product: putative UDP-glucose-4-epimerase

Products: NA

Alternate protein names: Stealth protein CpsY

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MSKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFLFIRNHKNRPVLAINIKLRPA
VERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDPRIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVE
NSLTRKVLPRKEVTPATIKLYGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI
RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYNSHAVESQLHRIPDLSEHFLY
SNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPTRSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLF
EMEQEFPEEFARTQESVFRSGTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG
SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQTAR

Sequences:

>Translated_542_residues
MSKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFLFIRNHKNRPVLAINIKLRPA
VERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDPRIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVE
NSLTRKVLPRKEVTPATIKLYGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI
RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYNSHAVESQLHRIPDLSEHFLY
SNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPTRSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLF
EMEQEFPEEFARTQESVFRSGTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG
SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQTAR
>Mature_541_residues
SKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFLFIRNHKNRPVLAINIKLRPAV
ERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDPRIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVEN
SLTRKVLPRKEVTPATIKLYGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARIR
QIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYNSHAVESQLHRIPDLSEHFLYS
NDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPTRSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLFE
MEQEFPEEFARTQESVFRSGTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDGS
FPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQTAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the stealth family

Homologues:

Organism=Homo sapiens, GI38202211, Length=106, Percent_Identity=46.2264150943396, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28573948, Length=159, Percent_Identity=38.3647798742138, Blast_Score=105, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPSY_MYCLE (Q50025)

Other databases:

- EMBL:   U15182
- EMBL:   Z95151
- EMBL:   AL583924
- PIR:   D87185
- RefSeq:   NP_302449.1
- EnsemblBacteria:   EBMYCT00000028506
- GeneID:   908309
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML2209
- NMPDR:   fig|272631.1.peg.1321
- Leproma:   ML2209
- GeneTree:   EBGT00050000018383
- HOGENOM:   HBG696421
- OMA:   THNSQAV
- ProtClustDB:   CLSK790750
- BioCyc:   MLEP272631:ML2209-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61976; Mature: 61845

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFL
CCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEE
FIRNHKNRPVLAINIKLRPAVERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDP
EEECCCCCCEEEEEEEECHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEECCCCCCCCCH
RIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVENSLTRKVLPRKEVTPATIKL
HHHHHHHHHCCCCCCCCCCEECEEEEEECHHHHHEECCCCCCHHHHCCCCCCCCCCEEEE
YGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI
EEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYN
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
SHAVESQLHRIPDLSEHFLYSNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPT
CHHHHHHHHHCCCCHHHHEECCCCEEECCCCCCEEEECCCCCEEEEEHHHHCCCCCCCCC
RSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLFEMEQEFPEEFARTQESVFRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG
CCCEEEHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCC
SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQT
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCC
AR
CC
>Mature Secondary Structure 
SKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFL
CCCCCCCCCCCHHHCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEE
FIRNHKNRPVLAINIKLRPAVERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDP
EEECCCCCCEEEEEEEECHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEECCCCCCCCCH
RIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVENSLTRKVLPRKEVTPATIKL
HHHHHHHHHCCCCCCCCCCEECEEEEEECHHHHHEECCCCCCHHHHCCCCCCCCCCEEEE
YGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI
EEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYN
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
SHAVESQLHRIPDLSEHFLYSNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPT
CHHHHHHHHHCCCCHHHHEECCCCEEECCCCCCEEEECCCCCEEEEEHHHHCCCCCCCCC
RSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLFEMEQEFPEEFARTQESVFRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG
CCCEEEHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCC
SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQT
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002