Definition Mycobacterium leprae Br4923 chromosome, complete genome.
Accession NC_011896
Length 3,268,071

Click here to switch to the map view.

The map label for this gene is 221230656

Identifier: 221230656

GI number: 221230656

Start: 2613382

End: 2614068

Strand: Direct

Name: 221230656

Synonym: MLBr_02200

Alternate gene names: NA

Gene position: 2613382-2614068 (Clockwise)

Preceding gene: 221230655

Following gene: 221230658

Centisome position: 79.97

GC content: 58.81

Gene sequence:

>687_bases
GTGACCTCCGACGAGGTCCGTGACGGAGCGGGCAGTCCGGCGGACTCCAGCAAGGGCAACAAGTGTACGGCCGCTGGGAT
GTTTCAAGCGGCCAAGCGATCTACGGTGAGCGCAGCCCGCAACATCCCGGCTTTCGACGACTTGCCAGTTCCCTCCGACA
CCGCGAATCTACGCGAAGGCGCTAACCTCAATAGCACTTTGCTGGCACTGCTACCGCTGGTCGGTGTGTGGCGCGGTGAA
GGGGAGGGTCGTGGACCTAATGGCGACTACCACTTCGGCCAGCAGATCGTGGTCTCGCACGACGGTGGTAACTACCTGAA
TTGGGAAGCCAGGTCCTGGCGGCTCAACGACGCTGGCGAATACCAGGAAACTAGCTTACGTGAGACGGGTTTCTGGCGTT
TTGTCAGCGATCCATATGATCCTACCGAATCTCAGGCGATCGAATTGCTGTTAGCCCATTCGGCTGGTTACGTAGAATTG
TTTTACGGGCGGCCACGCAACGCATCATCGTGGGAATTGGTCACTGATGCCCTAGCATGCAGCAAATCCGGCGTGCTCGT
CGGCGGCGCCAAACGGCTTTACGGTATCGTCGAAGGTGGCGACCTCGCCTATGTCGAAGAACGAGTGGATGCCGACGGCG
GATTGGTGCCAAATTTATCGGCGAGACTGTACCGATTCGCCGGATAG

Upstream 100 bases:

>100_bases
TGACCCGCGCCGGCGACGATGTAGAACGCAGCGATAAGGTGGTGGTCGGCCCCCACAAGTGGGAGGTACCTCCACCCGCT
TGCGAGGGAGAGCGGTGCAC

Downstream 100 bases:

>100_bases
CGGCCTGGCCAGCTAGGAAGAAGACACCTTCACACGATAACGCTGTGTGTACTGTTCGACGTCTGAGCAGCCGATAGTCT
AGGAAAAGGGGTCGGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREGANLNSTLLALLPLVGVWRGE
GEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGEYQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVEL
FYGRPRNASSWELVTDALACSKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG

Sequences:

>Translated_228_residues
MTSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREGANLNSTLLALLPLVGVWRGE
GEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGEYQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVEL
FYGRPRNASSWELVTDALACSKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG
>Mature_227_residues
TSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREGANLNSTLLALLPLVGVWRGEG
EGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGEYQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVELF
YGRPRNASSWELVTDALACSKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG

Specific function: May play a role in the intracellular transport of hydrophobic ligands (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0678 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2200_MYCLE (Q9CBC6)

Other databases:

- EMBL:   U15182
- EMBL:   AL583924
- PIR:   C87184
- RefSeq:   NP_302442.1
- ProteinModelPortal:   Q9CBC6
- SMR:   Q9CBC6
- EnsemblBacteria:   EBMYCT00000028287
- GeneID:   908461
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML2200
- NMPDR:   fig|272631.1.peg.1314
- Leproma:   ML2200
- GeneTree:   EBGT00050000017662
- HOGENOM:   HBG445899
- OMA:   YGLMPNN
- ProtClustDB:   CLSK790754
- BioCyc:   MLEP272631:ML2200-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01297
- InterPro:   IPR011038
- InterPro:   IPR014878
- InterPro:   IPR022939

Pfam domain/function: PF08768 DUF1794; SSF50814 Calycin

EC number: NA

Molecular weight: Translated: 24521; Mature: 24390

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: BINDING 192-192

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREG
CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC
ANLNSTLLALLPLVGVWRGEGEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGE
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCCC
YQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVELFYGRPRNASSWELVTDALAC
HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH
SKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG
CCCCEEEECHHHEEEEECCCCEEEHHHHHCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
TSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREG
CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC
ANLNSTLLALLPLVGVWRGEGEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGE
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCCC
YQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVELFYGRPRNASSWELVTDALAC
HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH
SKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG
CCCCEEEECHHHEEEEECCCCEEEHHHHHCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002