| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230553
Identifier: 221230553
GI number: 221230553
Start: 2375630
End: 2376343
Strand: Reverse
Name: 221230553
Synonym: MLBr_01988
Alternate gene names: NA
Gene position: 2376343-2375630 (Counterclockwise)
Preceding gene: 221230554
Following gene: 221230551
Centisome position: 72.71
GC content: 61.2
Gene sequence:
>714_bases ATGGATTGCGAGGTGGCCCGAGAAGCATTGTCGGCCCGACTTGATGGCGAGAGAGAGGCCGTGCCATCGGTGCGTGTCGA TGAGCACCTTGGTGAGTGCAGTGCGTGTCGTGCGTGGTTTGATCAGGTAGCTGACCAAGCACGCGACCTGCGTCAGCTGG TCGACTCCCGGCCTGCTATCACACCTGTTGATGCTCTCGGGATCGTGGCGCCGCCGCGGCGGCGACGTCCATTAATGACG TGGCAGCGCTGGGCGTTGCTTTGCGTGGGCATCGCACAAATCGTCCTGGCAACTGTGCAGGGGCTCGGCGTAAGCGTCGG ACTGACACACGATCGCGCGATGAGTTTCGGGAGTTACCTGCTCCACGAGTCAACGGCGTGGTCGGCTTCGCTCGGTGTGA TCATGATGGCAGCGGTTCTGTGGCCGGGTGTCGCTGCCGGGCTTGCGGGCGTTTTGACGGTGTTCGTCGGTTTGTTGACA GTCTACGTCGTCGTAGATGTAGTCGCCGGTGCCACCATCACGCTGCGAATTCTGATGCATCTGCCGGTGGCGATCGGTGC GGTCCTTGCTATCGCAGTGTGGCGACACAGTTCGACTCCACGGCCGACATTCGATGATGAAGTCGACGTCGATCTCGATA TTGTGTTGCCCCGGAACGCCTCTCGTGGGCGACGACGCGGTCATCTATGGCCTACCGATGGGTCGGCGGTTTAA
Upstream 100 bases:
>100_bases ATGAAATTCGGCGGAACGCTCCTGCCGTCTCATTAGCATCTTGCGCGTCGACATGAGCACCGACAGGACATTCCGTTGGC GTATGCGCGACGATAGGGGT
Downstream 100 bases:
>100_bases CCCCCGTCCTGTGTGCGACGGGTCGCAATGGGGAAGCGTCCACAGGACTACACGCAGTTGAACGGAGCCGAGTGGGCGGT GGACAACGCCATCGTTTGAC
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDALGIVAPPRRRRPLMT WQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYLLHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLT VYVVVDVVAGATITLRILMHLPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV
Sequences:
>Translated_237_residues MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDALGIVAPPRRRRPLMT WQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYLLHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLT VYVVVDVVAGATITLRILMHLPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV >Mature_237_residues MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAITPVDALGIVAPPRRRRPLMT WQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYLLHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLT VYVVVDVVAGATITLRILMHLPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV
Specific function: Unknown
COG id: COG5660
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25569; Mature: 25569
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI CCHHHHHHHHHHHCCCCHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH LHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLTVYVVVDVVAGATITLRILMH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDCEVAREALSARLDGEREAVPSVRVDEHLGECSACRAWFDQVADQARDLRQLVDSRPAI CCHHHHHHHHHHHCCCCHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPVDALGIVAPPRRRRPLMTWQRWALLCVGIAQIVLATVQGLGVSVGLTHDRAMSFGSYL CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH LHESTAWSASLGVIMMAAVLWPGVAAGLAGVLTVFVGLLTVYVVVDVVAGATITLRILMH HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LPVAIGAVLAIAVWRHSSTPRPTFDDEVDVDLDIVLPRNASRGRRRGHLWPTDGSAV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]