Definition Mycobacterium leprae Br4923 chromosome, complete genome.
Accession NC_011896
Length 3,268,071

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The map label for this gene is lpqF

Identifier: 221230511

GI number: 221230511

Start: 2305420

End: 2306784

Strand: Direct

Name: lpqF

Synonym: MLBr_01923

Alternate gene names: NA

Gene position: 2305420-2306784 (Clockwise)

Preceding gene: 221230510

Following gene: 221230516

Centisome position: 70.54

GC content: 58.32

Gene sequence:

>1365_bases
TTGCCACAACCAGCCAGACGAACTAACCAGCGCCCCCCACGGCACCGCACAGTGGCGTTGGCCGCCACCGCCGCTCTGGT
CGTTACTATGGCGCCAGGTTGCGCCCATTCCGCTTCCCCGTATGCGAACACCGCGGATCCAGGGCTGCGGATCGACACCA
GGACTCCTCCCGGTGTGCGTGCCCAGCAGATCATCGACATGCTTAACTCGGACTGGCCTATCGGCCTGGTCGGAGTTCGC
ACCTTCGCGTCGCATGACATGGTGGAAATAGTTAAAACCACCTTGGAAGAGCTGTGGTGGGATCGTCCCTTCACCCTCGA
AGGTGTAGACATCGGCGCTAGCGTCGCAACGCTGCACCTCATTTCCTCCTACGGCGCACAACAGGACATCCGAATTCACA
CCGACGGCAATAGCTGGGTTGACCGGTTCGACCTCAATACACAGCCACCGTCGATTACCTCGTGGTACGACATCGATGCC
GCGTTAAGCAAAACTGGCGCCCGCTACTCGTATCAGGTTGCCAAGGTCGATAACGGTCGATGCGATCCGGTGCAGGGCAC
CAATACCGCCGAATCCCTACCTTTGGCATCGATTTTCAAGTTATATGTGCTGCACGCCCTGGCGTATGCGGTCCGCAATG
GTACGGTGTCCTGGGATGATCAGCTAACCGTTACCGACAAGAGCAGAGCTGTGGGCTCTTCCGGTTTGGAATTGCCTATT
GGAGAACATGTTTCGGTTCGTACTGCCGCCGAGAAAATGATCGCAACTAGCGACAACATGGCCACCGACCTGCTCATTGG
GAAGATGGGTACGCATGCCGTCGAGGAAGCGCTCGTCACAGCCGGCCATCACGATCCAGCGAGCATGACTCCGTTCCCCA
CAATGTACGAGTTATTCTCAGTGGGCTGGGGTCAACCAGATCTACGCAGCCAATGGAAACAGGCATCCCAGCAACTGCGC
GCCCAACTGCTGCAGCAGGCGAATTCCACTCCTTACCAACCGGATCCAACCCGCGCTCACACCCCGGCTTCCAATTACGG
TGCTGAATGGTACGGAAGCGCCGAAGACATCTGTCGAATCCACGCGGCGCTGCAAGCAGACGCCATCGGCCAAGCCGCAC
CTGTCAGACAGATCCTATCCGCCGTCGCGGGTATCCAGCTAGATCGCAGCAAATGGCCGTATATCGGGGCGAAAGCCGGC
GGCCTACCGGGTGACCTAACCTTTAGCTGGTACGCCGTCGACAAGACACAACAATCTTGGGTAGTCAGCTTTCAGCTGAA
CTGGCCACGCGACCATGGACCGACCGTGACCAGCTGGATGCTCCAGCTCGCCAAACAGGTGTTCGCACTGTTTGCACCAC
GATAA

Upstream 100 bases:

>100_bases
GCGTGGGCGAACGGTCCCGCTATCGAAGCCCATGCTGGTCACAGCGCCAACCCGGTGGCGGCTGGTTCGTCGCTGCTGGA
ATTCGAGGTTGTACTGGACG

Downstream 100 bases:

>100_bases
CATACGCTTTCAACCGTCCCCGTGGTAAGGCATGACGGCGCAGTTGACCGGAGCGACATCGATACACTTTAATCGTTTCA
GGTGAGTGAAAGAGGCCGAC

Product: probale secreted protein

Products: NA

Alternate protein names: Lipoprotein LpqF; Probale Secreted Protein; Beta Lactamase-Related Protein; Beta-Lactamase Class A-Like Protein; LpqF Protein

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MPQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVRAQQIIDMLNSDWPIGLVGVR
TFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDA
ALSKTGARYSYQVAKVDNGRCDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI
GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFSVGWGQPDLRSQWKQASQQLR
AQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAG
GLPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR

Sequences:

>Translated_454_residues
MPQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVRAQQIIDMLNSDWPIGLVGVR
TFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDA
ALSKTGARYSYQVAKVDNGRCDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI
GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFSVGWGQPDLRSQWKQASQQLR
AQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAG
GLPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR
>Mature_453_residues
PQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVRAQQIIDMLNSDWPIGLVGVRT
FASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDAA
LSKTGARYSYQVAKVDNGRCDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPIG
EHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFSVGWGQPDLRSQWKQASQQLRA
QLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAGG
LPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR

Specific function: Unknown

COG id: COG2367

COG function: function code V; Beta-lactamase class A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49621; Mature: 49490

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVR
CCCCCCCCCCCCCCHHEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCH
AQQIIDMLNSDWPIGLVGVRTFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHL
HHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHH
ISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDAALSKTGARYSYQVAKVDNGR
HHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCC
CDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCCCCCC
GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFS
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
VGWGQPDLRSQWKQASQQLRAQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
HAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAGGLPGDLTFSWYAVDKTQQSW
HHHHHHHHCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE
VVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVR
CCCCCCCCCCCCCHHEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCH
AQQIIDMLNSDWPIGLVGVRTFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHL
HHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHH
ISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDAALSKTGARYSYQVAKVDNGR
HHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCC
CDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCCCCCC
GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFS
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
VGWGQPDLRSQWKQASQQLRAQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
HAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAGGLPGDLTFSWYAVDKTQQSW
HHHHHHHHCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE
VVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA