| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is lpqF
Identifier: 221230511
GI number: 221230511
Start: 2305420
End: 2306784
Strand: Direct
Name: lpqF
Synonym: MLBr_01923
Alternate gene names: NA
Gene position: 2305420-2306784 (Clockwise)
Preceding gene: 221230510
Following gene: 221230516
Centisome position: 70.54
GC content: 58.32
Gene sequence:
>1365_bases TTGCCACAACCAGCCAGACGAACTAACCAGCGCCCCCCACGGCACCGCACAGTGGCGTTGGCCGCCACCGCCGCTCTGGT CGTTACTATGGCGCCAGGTTGCGCCCATTCCGCTTCCCCGTATGCGAACACCGCGGATCCAGGGCTGCGGATCGACACCA GGACTCCTCCCGGTGTGCGTGCCCAGCAGATCATCGACATGCTTAACTCGGACTGGCCTATCGGCCTGGTCGGAGTTCGC ACCTTCGCGTCGCATGACATGGTGGAAATAGTTAAAACCACCTTGGAAGAGCTGTGGTGGGATCGTCCCTTCACCCTCGA AGGTGTAGACATCGGCGCTAGCGTCGCAACGCTGCACCTCATTTCCTCCTACGGCGCACAACAGGACATCCGAATTCACA CCGACGGCAATAGCTGGGTTGACCGGTTCGACCTCAATACACAGCCACCGTCGATTACCTCGTGGTACGACATCGATGCC GCGTTAAGCAAAACTGGCGCCCGCTACTCGTATCAGGTTGCCAAGGTCGATAACGGTCGATGCGATCCGGTGCAGGGCAC CAATACCGCCGAATCCCTACCTTTGGCATCGATTTTCAAGTTATATGTGCTGCACGCCCTGGCGTATGCGGTCCGCAATG GTACGGTGTCCTGGGATGATCAGCTAACCGTTACCGACAAGAGCAGAGCTGTGGGCTCTTCCGGTTTGGAATTGCCTATT GGAGAACATGTTTCGGTTCGTACTGCCGCCGAGAAAATGATCGCAACTAGCGACAACATGGCCACCGACCTGCTCATTGG GAAGATGGGTACGCATGCCGTCGAGGAAGCGCTCGTCACAGCCGGCCATCACGATCCAGCGAGCATGACTCCGTTCCCCA CAATGTACGAGTTATTCTCAGTGGGCTGGGGTCAACCAGATCTACGCAGCCAATGGAAACAGGCATCCCAGCAACTGCGC GCCCAACTGCTGCAGCAGGCGAATTCCACTCCTTACCAACCGGATCCAACCCGCGCTCACACCCCGGCTTCCAATTACGG TGCTGAATGGTACGGAAGCGCCGAAGACATCTGTCGAATCCACGCGGCGCTGCAAGCAGACGCCATCGGCCAAGCCGCAC CTGTCAGACAGATCCTATCCGCCGTCGCGGGTATCCAGCTAGATCGCAGCAAATGGCCGTATATCGGGGCGAAAGCCGGC GGCCTACCGGGTGACCTAACCTTTAGCTGGTACGCCGTCGACAAGACACAACAATCTTGGGTAGTCAGCTTTCAGCTGAA CTGGCCACGCGACCATGGACCGACCGTGACCAGCTGGATGCTCCAGCTCGCCAAACAGGTGTTCGCACTGTTTGCACCAC GATAA
Upstream 100 bases:
>100_bases GCGTGGGCGAACGGTCCCGCTATCGAAGCCCATGCTGGTCACAGCGCCAACCCGGTGGCGGCTGGTTCGTCGCTGCTGGA ATTCGAGGTTGTACTGGACG
Downstream 100 bases:
>100_bases CATACGCTTTCAACCGTCCCCGTGGTAAGGCATGACGGCGCAGTTGACCGGAGCGACATCGATACACTTTAATCGTTTCA GGTGAGTGAAAGAGGCCGAC
Product: probale secreted protein
Products: NA
Alternate protein names: Lipoprotein LpqF; Probale Secreted Protein; Beta Lactamase-Related Protein; Beta-Lactamase Class A-Like Protein; LpqF Protein
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MPQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVRAQQIIDMLNSDWPIGLVGVR TFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDA ALSKTGARYSYQVAKVDNGRCDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFSVGWGQPDLRSQWKQASQQLR AQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAG GLPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR
Sequences:
>Translated_454_residues MPQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVRAQQIIDMLNSDWPIGLVGVR TFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDA ALSKTGARYSYQVAKVDNGRCDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFSVGWGQPDLRSQWKQASQQLR AQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAG GLPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR >Mature_453_residues PQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVRAQQIIDMLNSDWPIGLVGVRT FASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHLISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDAA LSKTGARYSYQVAKVDNGRCDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPIG EHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFSVGWGQPDLRSQWKQASQQLRA QLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRIHAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAGG LPGDLTFSWYAVDKTQQSWVVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49621; Mature: 49490
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVR CCCCCCCCCCCCCCHHEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCH AQQIIDMLNSDWPIGLVGVRTFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHL HHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHH ISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDAALSKTGARYSYQVAKVDNGR HHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCC CDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCCCCCC GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFS CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VGWGQPDLRSQWKQASQQLRAQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH HAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAGGLPGDLTFSWYAVDKTQQSW HHHHHHHHCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE VVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PQPARRTNQRPPRHRTVALAATAALVVTMAPGCAHSASPYANTADPGLRIDTRTPPGVR CCCCCCCCCCCCCHHEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCH AQQIIDMLNSDWPIGLVGVRTFASHDMVEIVKTTLEELWWDRPFTLEGVDIGASVATLHL HHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHH ISSYGAQQDIRIHTDGNSWVDRFDLNTQPPSITSWYDIDAALSKTGARYSYQVAKVDNGR HHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCC CDPVQGTNTAESLPLASIFKLYVLHALAYAVRNGTVSWDDQLTVTDKSRAVGSSGLELPI CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCCCCCC GEHVSVRTAAEKMIATSDNMATDLLIGKMGTHAVEEALVTAGHHDPASMTPFPTMYELFS CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VGWGQPDLRSQWKQASQQLRAQLLQQANSTPYQPDPTRAHTPASNYGAEWYGSAEDICRI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH HAALQADAIGQAAPVRQILSAVAGIQLDRSKWPYIGAKAGGLPGDLTFSWYAVDKTQQSW HHHHHHHHCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE VVSFQLNWPRDHGPTVTSWMLQLAKQVFALFAPR EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA