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The map label for this gene is ydiF [H]

Identifier: 221230450

GI number: 221230450

Start: 2198882

End: 2200519

Strand: Reverse

Name: ydiF [H]

Synonym: MLBr_01816

Alternate gene names: 221230450

Gene position: 2200519-2198882 (Counterclockwise)

Preceding gene: 221230451

Following gene: 221230448

Centisome position: 67.33

GC content: 60.99

Gene sequence:

>1638_bases
GTGATCACGGCCACGGACCTTGAGGTCCGCGCTGGTGCGCGCATCTTGCTCTCATCCGACGGTCCGGACCTGCGCGTACA
GCCCGGCGACCGCATTGGGCTGGTTGGACGCAACGGCGCAGGCAAGACCACCACCTTGCGCATTTTGGCAGGGGCAACTG
AACCCTATGCCGGGTCAGTCACCTGGACCGGCGAGATTGGTTACCTGCCACAAGATCCCAAAGTGGGCAATCTTGACGTG
TTAGCCCGAGACCGGGTGCTGTCCGCCCGCGGGTTGGACGTGCTGCTAACCGATCTAGAGAAGCAGCAGGCTTTGATGGC
TGAGGTAGCCGACGACGATGCGCGTGACCGTGCGATCCGTCGCTACGGCCAGCTCGAGGAGCGATTCCTTGCGTTGGGGG
GTTACAGCGCCGAAAGCGAAGCTGGCAGGATATGCGCGAGTCTAGGTCTGCCTGAAAGGGTGCTGGTCCAGCAGTTGTGC
ACCTTGTCGGGAGGTCAGCGCCGTAGGGTAGAGCTGGCGCGTATTCTGTTCGCGGCATCCAGAGCAGGAACTGGTGCTTC
CGGTTCGGGAACCACGCTGTTGCTCGATGAGCCGACCAACCACCTCGATGCCGATTCGCTTGGGTGGCTGCGGGATTTCT
TGCGGTCGCACACTGGTGGACTGGTAGTGATCAGCCATAACGTCGAGTTGATCGCCGCTGTCGTCAACCGGGTGTGGTTC
CTGGATGCCGTGCTCGGCAAGGTCGATGTCTACAACATGGGCTGGTACAAGTACCTCGACTCCCGGGCCACCGACGAGCA
GCGCCGCCGCCGAGAACGCGTCAACGCTGAACGCAAGGCCACTGCGTTGCGAACACAAGCTGCCAAGATGGGTGCTAAGG
CAACCAAAGCGGTTGCGGCTCAAAATATGTTGCGTCGAGCCGATCGGATGATGGCAGCACTTGACGAGGAACGGGTCATC
GAAAAAGTGGCCCAGATCAAGTTTCCTACACCAGCGGCGTGCGGGCGCACGCCGCTGGTGGCCAAGGGACTCAGCAAGAC
GTACGGGTCCCTTGAAGTGTTCACTGGTGTGAATCTGGCTATTGACCGTGGCTCGCGAGTGGTCGTACTGGGCCTCAACG
GCGCCGGCAAGACCACGCTGTTGCGAGTGCTGGCCGGAGCTGAGAAGCCCGACGTCGGCAGGCTGGAACCTGGACACGGT
TTGCGGATCGGCTATTTCGCCCAGGAACACGACACGCTCGATAACGAAGACACCGTCTGGCAGAACATTCGGCACACCGC
ACCCGAGTTCGGTGAACAGGATTTACGCGGACTGCTCGGCGCGTTCATGTTCAGCGGCCCACAGCTCGACCAACTGGCTG
GCACCCTTTCCGGTGGTGAGAAGACCCGACTCGCACTCGCAGGCCTGGTAGCGTCCACGGCTAACGTGCTACTACTCGAT
GAACCGACCAACAATCTCGATCCCGCGTCGCGCAAGCAGGTGCTCGACGCGTTGCGTAATTATCAGGGTGCAGTGGTATT
GGTGACGCACGATCCCGGAGCGGCAAAAGCGCTGGATCCGCAACGCGTCGTGTTGTTGCCTGACGGCACTGAGGACTATT
GGTCCGACGAATATCGGGATCTCATTGAGTTGGCCTGA

Upstream 100 bases:

>100_bases
CGTCAACGTTGAAGAAGCGTTTGCCGCGTGTGCAGAGAAGCGACCGGCAGTGTTTACCTAAGACAAGTGACGATGATAAA
CAACAAAAAGGGGAGCGAAT

Downstream 100 bases:

>100_bases
CCAATCGAAGCCGGACCGTGCAGGACGTTTCGGCCAAAGTGGCTTCGCAGCGGACGACGGGTTCTATAACGTTATGAGCT
TAGGGTCTGTCGATGCGTGG

Product: ABC transporter ATP-binding protein, possibly in EF-3 subfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MITATDLEVRAGARILLSSDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGATEPYAGSVTWTGEIGYLPQDPKVGNLDV
LARDRVLSARGLDVLLTDLEKQQALMAEVADDDARDRAIRRYGQLEERFLALGGYSAESEAGRICASLGLPERVLVQQLC
TLSGGQRRRVELARILFAASRAGTGASGSGTTLLLDEPTNHLDADSLGWLRDFLRSHTGGLVVISHNVELIAAVVNRVWF
LDAVLGKVDVYNMGWYKYLDSRATDEQRRRRERVNAERKATALRTQAAKMGAKATKAVAAQNMLRRADRMMAALDEERVI
EKVAQIKFPTPAACGRTPLVAKGLSKTYGSLEVFTGVNLAIDRGSRVVVLGLNGAGKTTLLRVLAGAEKPDVGRLEPGHG
LRIGYFAQEHDTLDNEDTVWQNIRHTAPEFGEQDLRGLLGAFMFSGPQLDQLAGTLSGGEKTRLALAGLVASTANVLLLD
EPTNNLDPASRKQVLDALRNYQGAVVLVTHDPGAAKALDPQRVVLLPDGTEDYWSDEYRDLIELA

Sequences:

>Translated_545_residues
MITATDLEVRAGARILLSSDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGATEPYAGSVTWTGEIGYLPQDPKVGNLDV
LARDRVLSARGLDVLLTDLEKQQALMAEVADDDARDRAIRRYGQLEERFLALGGYSAESEAGRICASLGLPERVLVQQLC
TLSGGQRRRVELARILFAASRAGTGASGSGTTLLLDEPTNHLDADSLGWLRDFLRSHTGGLVVISHNVELIAAVVNRVWF
LDAVLGKVDVYNMGWYKYLDSRATDEQRRRRERVNAERKATALRTQAAKMGAKATKAVAAQNMLRRADRMMAALDEERVI
EKVAQIKFPTPAACGRTPLVAKGLSKTYGSLEVFTGVNLAIDRGSRVVVLGLNGAGKTTLLRVLAGAEKPDVGRLEPGHG
LRIGYFAQEHDTLDNEDTVWQNIRHTAPEFGEQDLRGLLGAFMFSGPQLDQLAGTLSGGEKTRLALAGLVASTANVLLLD
EPTNNLDPASRKQVLDALRNYQGAVVLVTHDPGAAKALDPQRVVLLPDGTEDYWSDEYRDLIELA
>Mature_545_residues
MITATDLEVRAGARILLSSDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGATEPYAGSVTWTGEIGYLPQDPKVGNLDV
LARDRVLSARGLDVLLTDLEKQQALMAEVADDDARDRAIRRYGQLEERFLALGGYSAESEAGRICASLGLPERVLVQQLC
TLSGGQRRRVELARILFAASRAGTGASGSGTTLLLDEPTNHLDADSLGWLRDFLRSHTGGLVVISHNVELIAAVVNRVWF
LDAVLGKVDVYNMGWYKYLDSRATDEQRRRRERVNAERKATALRTQAAKMGAKATKAVAAQNMLRRADRMMAALDEERVI
EKVAQIKFPTPAACGRTPLVAKGLSKTYGSLEVFTGVNLAIDRGSRVVVLGLNGAGKTTLLRVLAGAEKPDVGRLEPGHG
LRIGYFAQEHDTLDNEDTVWQNIRHTAPEFGEQDLRGLLGAFMFSGPQLDQLAGTLSGGEKTRLALAGLVASTANVLLLD
EPTNNLDPASRKQVLDALRNYQGAVVLVTHDPGAAKALDPQRVVLLPDGTEDYWSDEYRDLIELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=512, Percent_Identity=29.4921875, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI10947137, Length=499, Percent_Identity=28.8577154308617, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI27881506, Length=499, Percent_Identity=28.8577154308617, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI10947135, Length=504, Percent_Identity=31.547619047619, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI69354671, Length=504, Percent_Identity=31.547619047619, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI116734710, Length=239, Percent_Identity=30.1255230125523, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI27477115, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=28.8659793814433, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI27881501, Length=207, Percent_Identity=28.0193236714976, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI30795238, Length=207, Percent_Identity=28.0193236714976, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI1789751, Length=517, Percent_Identity=31.7214700193424, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1787041, Length=547, Percent_Identity=30.5301645338208, Blast_Score=231, Evalue=7e-62,
Organism=Escherichia coli, GI2367384, Length=497, Percent_Identity=31.7907444668008, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1787182, Length=505, Percent_Identity=28.7128712871287, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI87081782, Length=549, Percent_Identity=26.0473588342441, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=32.7014218009479, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=30.7339449541284, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787758, Length=187, Percent_Identity=31.0160427807487, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=27.4881516587678, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1786703, Length=196, Percent_Identity=29.5918367346939, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787029, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789593, Length=194, Percent_Identity=31.4432989690722, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=32.0441988950276, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=191, Percent_Identity=30.8900523560209, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=27.1111111111111, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48994943, Length=192, Percent_Identity=30.2083333333333, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786398, Length=201, Percent_Identity=28.8557213930348, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787105, Length=226, Percent_Identity=30.5309734513274, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=522, Percent_Identity=27.9693486590038, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17553372, Length=554, Percent_Identity=29.2418772563177, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17555318, Length=495, Percent_Identity=27.6767676767677, Blast_Score=168, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17510237, Length=219, Percent_Identity=25.5707762557078, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=233, Percent_Identity=28.755364806867, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=233, Percent_Identity=28.755364806867, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=233, Percent_Identity=28.755364806867, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=173, Percent_Identity=30.635838150289, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=510, Percent_Identity=29.0196078431373, Blast_Score=181, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=28.2771535580524, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6324314, Length=171, Percent_Identity=32.1637426900585, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323217, Length=244, Percent_Identity=29.9180327868852, Blast_Score=67, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6325030, Length=190, Percent_Identity=31.0526315789474, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323278, Length=168, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666836, Length=557, Percent_Identity=28.9048473967684, Blast_Score=191, Evalue=8e-49,
Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=29.7445255474453, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24642252, Length=498, Percent_Identity=29.1164658634538, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI18859989, Length=498, Percent_Identity=29.1164658634538, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24582014, Length=195, Percent_Identity=33.8461538461538, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24582012, Length=195, Percent_Identity=33.8461538461538, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221500365, Length=183, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116007184, Length=183, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221512771, Length=215, Percent_Identity=29.7674418604651, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281362751, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650853, Length=189, Percent_Identity=29.1005291005291, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650855, Length=189, Percent_Identity=29.1005291005291, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85725262, Length=188, Percent_Identity=29.7872340425532, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643674, Length=199, Percent_Identity=30.1507537688442, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45550390, Length=187, Percent_Identity=32.0855614973262, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281363262, Length=200, Percent_Identity=29.5, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58988; Mature: 58988

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITATDLEVRAGARILLSSDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGATEPYAGSV
CCCCCCEEECCCCEEEEECCCCCEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCE
TWTGEIGYLPQDPKVGNLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADDDARDRAIR
EEECCCCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RYGQLEERFLALGGYSAESEAGRICASLGLPERVLVQQLCTLSGGQRRRVELARILFAAS
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RAGTGASGSGTTLLLDEPTNHLDADSLGWLRDFLRSHTGGLVVISHNVELIAAVVNRVWF
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
LDAVLGKVDVYNMGWYKYLDSRATDEQRRRRERVNAERKATALRTQAAKMGAKATKAVAA
HHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHH
QNMLRRADRMMAALDEERVIEKVAQIKFPTPAACGRTPLVAKGLSKTYGSLEVFTGVNLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEE
IDRGSRVVVLGLNGAGKTTLLRVLAGAEKPDVGRLEPGHGLRIGYFAQEHDTLDNEDTVW
EECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHH
QNIRHTAPEFGEQDLRGLLGAFMFSGPQLDQLAGTLSGGEKTRLALAGLVASTANVLLLD
HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEE
EPTNNLDPASRKQVLDALRNYQGAVVLVTHDPGAAKALDPQRVVLLPDGTEDYWSDEYRD
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
LIELA
HHHCC
>Mature Secondary Structure
MITATDLEVRAGARILLSSDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGATEPYAGSV
CCCCCCEEECCCCEEEEECCCCCEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCE
TWTGEIGYLPQDPKVGNLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADDDARDRAIR
EEECCCCCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RYGQLEERFLALGGYSAESEAGRICASLGLPERVLVQQLCTLSGGQRRRVELARILFAAS
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RAGTGASGSGTTLLLDEPTNHLDADSLGWLRDFLRSHTGGLVVISHNVELIAAVVNRVWF
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
LDAVLGKVDVYNMGWYKYLDSRATDEQRRRRERVNAERKATALRTQAAKMGAKATKAVAA
HHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHH
QNMLRRADRMMAALDEERVIEKVAQIKFPTPAACGRTPLVAKGLSKTYGSLEVFTGVNLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEE
IDRGSRVVVLGLNGAGKTTLLRVLAGAEKPDVGRLEPGHGLRIGYFAQEHDTLDNEDTVW
EECCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHH
QNIRHTAPEFGEQDLRGLLGAFMFSGPQLDQLAGTLSGGEKTRLALAGLVASTANVLLLD
HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEE
EPTNNLDPASRKQVLDALRNYQGAVVLVTHDPGAAKALDPQRVVLLPDGTEDYWSDEYRD
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
LIELA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]