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The map label for this gene is ybbK [C]

Identifier: 221230437

GI number: 221230437

Start: 2183122

End: 2184246

Strand: Reverse

Name: ybbK [C]

Synonym: MLBr_01802

Alternate gene names: 221230437

Gene position: 2184246-2183122 (Counterclockwise)

Preceding gene: 221230438

Following gene: 221230436

Centisome position: 66.84

GC content: 62.22

Gene sequence:

>1125_bases
GTGCAAGGTGTGGTTGCAGGTCTGGTGTTGCTTGCCGTCCTGACGATATTCGCCATCGTTGTGGTGGCCAAGTCGATTGT
GTTGATTCCACAAGCCGAAGCTGCGGTAGTCGAACGGCTAGGTCGGTACGGTCGTACCGTCAGCGGGCAGCTGACCTTAT
TGGTGCTCTTCATTGACCGTGTCCGCGCCCGAGTGGACCTGCGGGAGCGGGTGGTGTCCTTCCCGCCGCAGCCGGTGATC
ACCGAGGACAATTTGACTCTCAACATTGACACCGTGGTCTACTTCCAGGTCACCGTTCCGCAGGCGGCAGTGTATGAAAT
CAGTAACTACATTGTCGGCGTTGAACAGCTCACCACGACTACGTTGCGCAATGTCGTTGGTGGCATGACGCTGGAGCAGA
CTCTGACCTCCCGTGACCAGATCAACGCTCAGCTGCGGGGTGTGCTGGACGAGGCGACCGGTCGCTGGGGACTGCGGGTG
GCCCGGGTGGAGCTGCGCAGCATCGACCCACCGCCGTCGATCCAGACCTCGATGGAAAAGCAGATGAAGGCCGACCGGGA
GAAGCGGGCGATGATCCTGACCGCCGAAGGCACCCGGGAAGCGGCCATCAAGCAGGCCGAAGGCAACAAGCAGGCGCAGA
TCCTGGCTGCCGAGGGCGCCAAGCAGGCCGTGATTCTCGCCGCCGAGGCCGACCGGCAGTCGCGGATGCTACGTGCTCAG
GGTAAGCGTGCCGCGGCCTATCTCCAGGCGCAGGGGCAGGCCAAGGCCATCGAGAAGACGTTCGCTGCGATCAAAGCCGG
CAGGCCGACCCCGGAAATGCTGGCTTACCAGTACCTGCAGATACTGCCGCAGATGGCGCGTGGTGACGCCAACAAGGTGT
GGGTTGTCCCCAGCGACTTCAGCACGGCGTTGCAAGGGTTCACCAAACTGCTGGGCGCCCCGGGTGAAGACGGGGTATTT
CGGTTCCAGCCGTCCCCCGTTGACTCTTCCGATCAGGTTGTCAAGCATGCTGCCGACGAGGATGACGCCGAAGTCGCGGA
CTGGTTCTCCGTTGAGACCGATCCGGCGATCGCTCAAGCGGTCGCCAAAGCTGAGGCGATGGTTTACCAGCCAGTCGACG
AATAG

Upstream 100 bases:

>100_bases
CGGCGAGTCGGTAATCGTTGTGCACATCGACGGCGCCACGGCGATGGTATTTAGGAACGGGTAAGAGCGTCGGTAGAACC
CTGCGAAGAAAGGAACCCCA

Downstream 100 bases:

>100_bases
ATAGGTTTGCGCCCCGAGTTTCCTTGATAGGTTTTGTGTATGAGTGTTTTGACTGCAACGAAAGCCTATGCAGCGCCTAA
TTTTCCAGGCCGGTAGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MQGVVAGLVLLAVLTIFAIVVVAKSIVLIPQAEAAVVERLGRYGRTVSGQLTLLVLFIDRVRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQTSMEKQMKADREKRAMILTAEGTREAAIKQAEGNKQAQILAAEGAKQAVILAAEADRQSRMLRAQ
GKRAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQILPQMARGDANKVWVVPSDFSTALQGFTKLLGAPGEDGVF
RFQPSPVDSSDQVVKHAADEDDAEVADWFSVETDPAIAQAVAKAEAMVYQPVDE

Sequences:

>Translated_374_residues
MQGVVAGLVLLAVLTIFAIVVVAKSIVLIPQAEAAVVERLGRYGRTVSGQLTLLVLFIDRVRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQTSMEKQMKADREKRAMILTAEGTREAAIKQAEGNKQAQILAAEGAKQAVILAAEADRQSRMLRAQ
GKRAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQILPQMARGDANKVWVVPSDFSTALQGFTKLLGAPGEDGVF
RFQPSPVDSSDQVVKHAADEDDAEVADWFSVETDPAIAQAVAKAEAMVYQPVDE
>Mature_374_residues
MQGVVAGLVLLAVLTIFAIVVVAKSIVLIPQAEAAVVERLGRYGRTVSGQLTLLVLFIDRVRARVDLRERVVSFPPQPVI
TEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRV
ARVELRSIDPPPSIQTSMEKQMKADREKRAMILTAEGTREAAIKQAEGNKQAQILAAEGAKQAVILAAEADRQSRMLRAQ
GKRAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQILPQMARGDANKVWVVPSDFSTALQGFTKLLGAPGEDGVF
RFQPSPVDSSDQVVKHAADEDDAEVADWFSVETDPAIAQAVAKAEAMVYQPVDE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=41.3265306122449, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI21686995, Length=220, Percent_Identity=36.3636363636364, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI221316744, Length=219, Percent_Identity=36.5296803652968, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI38016911, Length=208, Percent_Identity=34.1346153846154, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI7657615, Length=193, Percent_Identity=24.3523316062176, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1786697, Length=319, Percent_Identity=36.3636363636364, Blast_Score=209, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI32564147, Length=282, Percent_Identity=35.4609929078014, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI193209764, Length=178, Percent_Identity=35.3932584269663, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17569493, Length=178, Percent_Identity=35.3932584269663, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=207, Percent_Identity=35.7487922705314, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987612, Length=207, Percent_Identity=35.7487922705314, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI193210507, Length=222, Percent_Identity=34.2342342342342, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570161, Length=222, Percent_Identity=34.2342342342342, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=199, Percent_Identity=32.6633165829146, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71987621, Length=205, Percent_Identity=34.6341463414634, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17569497, Length=200, Percent_Identity=33, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17569499, Length=203, Percent_Identity=33.4975369458128, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17570459, Length=205, Percent_Identity=35.1219512195122, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71989948, Length=158, Percent_Identity=36.7088607594937, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=168, Percent_Identity=36.9047619047619, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=118, Percent_Identity=36.4406779661017, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45550506, Length=278, Percent_Identity=32.7338129496403, Blast_Score=154, Evalue=8e-38,
Organism=Drosophila melanogaster, GI281361633, Length=209, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281361631, Length=209, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI18860517, Length=212, Percent_Identity=33.0188679245283, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI21356845, Length=200, Percent_Identity=30, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI45556022, Length=195, Percent_Identity=35.8974358974359, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281365664, Length=197, Percent_Identity=35.5329949238579, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24657857, Length=197, Percent_Identity=35.5329949238579, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI62484448, Length=196, Percent_Identity=35.2040816326531, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI62484274, Length=196, Percent_Identity=35.2040816326531, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28573263, Length=205, Percent_Identity=33.6585365853659, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281361635, Length=142, Percent_Identity=35.2112676056338, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 40696; Mature: 40696

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00024 HEMOPEXIN ; PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVVAGLVLLAVLTIFAIVVVAKSIVLIPQAEAAVVERLGRYGRTVSGQLTLLVLFIDR
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQTSMEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHH
QMKADREKRAMILTAEGTREAAIKQAEGNKQAQILAAEGAKQAVILAAEADRQSRMLRAQ
HHHHCHHHCEEEEEECCCHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHC
GKRAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQILPQMARGDANKVWVVPSDF
CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
STALQGFTKLLGAPGEDGVFRFQPSPVDSSDQVVKHAADEDDAEVADWFSVETDPAIAQA
HHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHH
VAKAEAMVYQPVDE
HHHHHHHEECCCCC
>Mature Secondary Structure
MQGVVAGLVLLAVLTIFAIVVVAKSIVLIPQAEAAVVERLGRYGRTVSGQLTLLVLFIDR
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTT
HHHHHHHHHHHHCCCCCCCEECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
TLRNVVGGMTLEQTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQTSMEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCHHHHHHH
QMKADREKRAMILTAEGTREAAIKQAEGNKQAQILAAEGAKQAVILAAEADRQSRMLRAQ
HHHHCHHHCEEEEEECCCHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHC
GKRAAAYLQAQGQAKAIEKTFAAIKAGRPTPEMLAYQYLQILPQMARGDANKVWVVPSDF
CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
STALQGFTKLLGAPGEDGVFRFQPSPVDSSDQVVKHAADEDDAEVADWFSVETDPAIAQA
HHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHH
VAKAEAMVYQPVDE
HHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]