| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is cdsA
Identifier: 221230310
GI number: 221230310
Start: 1913823
End: 1914761
Strand: Reverse
Name: cdsA
Synonym: MLBr_01589
Alternate gene names: 221230310
Gene position: 1914761-1913823 (Counterclockwise)
Preceding gene: 221230311
Following gene: 221230308
Centisome position: 58.59
GC content: 59.42
Gene sequence:
>939_bases GTGGCTTCCACCGATCCCGGCACAGGCACCCCGCTTGACGAGTCGGTGCCTGGGATCAAGAGGGCTATGCGGCAATCGAC TAAGAATACCCCCCGGGCGGGACGTAATCTGCCCGCCGCGATCGCGGTGGGCTTAAGTATTGGTGGTGTTCTCGTCGCAA CGCTGGTGTTTGCTCCGCGAATCTGGGTTGTCTTGTGCGCTGGCGCCATTTTCGTTGCTAGCCATGAGGTGGTGCGGCGG CTACGGGAAGCTGGATATGTGATTCCGGCTATCCCGCTGCTCATCGGTGGGCAGTTCACCGTCTGGTTAACTTGGCCGTA TCGCACCGTTGGTGCATTGGCTGGCTTCGGTGCGACGGTGGTGGTCTGCATGATTTGGCGGCTTGTCATGCACGACAACA GCAAGCAGCACGAATCTCGGGAAGCTTTGGCAGGTCCGCCGGTGTCAAATTACCTGCGGGACGCGTCGGCCACCGTTTTT TTGGCCGCGTGGGTCCCGTTGTTTGCCTCGTTCGCAGCATTGCTGGTTTATCCGAAGGATGGTGCGGGCCGGGTATTCTG CCTGATGATTGCGGTGGTAGCTTCCGATGTGGGTGGTTACACAGTAGGGGTACTTTTCGGCAAACATCCACTGGTTCCAA GGATTAGCCCGAATAAGTCCTGGGAGGGATTCGCCGGTTCGCTGGTCTGCGGGACCACCGCAACCATCCTGACTGCTACC TTCCTGGCTGGCAAAACACCGTGGGTTGGGGCTTTGCTCAGTTTTGTACTGGTGCTCACCTGCACGCTGGGGGATTTGGT GGAGTCCCAAGTTAAGCGCGACCTCGGCATCAAAGATATGGGCCGGCTGCTACCCGGCCACGGTGGCCTGATGGACCGGC TTGATGGTGTGCTGCCGTCGGCGGTTGTAGCTTGGACCATGCTTACGTTGCTGCCCTGA
Upstream 100 bases:
>100_bases ACCCACCAGTACGTTATCCAGATTGACGAACTGGTCAAGCACAAAGAAGGTGAGCTGCTGGAGGTCTAGCGGCCGTTCAG CAGCTAATTCATTCAGGTCC
Downstream 100 bases:
>100_bases CAAGGCTGGTACCGGACAGATTATGGCCCAAGAGTTGGTGTTCTCTGAGCCGTGTCCAGGCCGACTGCCGTGGCACTTGG CCGACCTCGACGCGGTCGGT
Product: putative phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MASTDPGTGTPLDESVPGIKRAMRQSTKNTPRAGRNLPAAIAVGLSIGGVLVATLVFAPRIWVVLCAGAIFVASHEVVRR LREAGYVIPAIPLLIGGQFTVWLTWPYRTVGALAGFGATVVVCMIWRLVMHDNSKQHESREALAGPPVSNYLRDASATVF LAAWVPLFASFAALLVYPKDGAGRVFCLMIAVVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTAT FLAGKTPWVGALLSFVLVLTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVVAWTMLTLLP
Sequences:
>Translated_312_residues MASTDPGTGTPLDESVPGIKRAMRQSTKNTPRAGRNLPAAIAVGLSIGGVLVATLVFAPRIWVVLCAGAIFVASHEVVRR LREAGYVIPAIPLLIGGQFTVWLTWPYRTVGALAGFGATVVVCMIWRLVMHDNSKQHESREALAGPPVSNYLRDASATVF LAAWVPLFASFAALLVYPKDGAGRVFCLMIAVVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTAT FLAGKTPWVGALLSFVLVLTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVVAWTMLTLLP >Mature_311_residues ASTDPGTGTPLDESVPGIKRAMRQSTKNTPRAGRNLPAAIAVGLSIGGVLVATLVFAPRIWVVLCAGAIFVASHEVVRRL REAGYVIPAIPLLIGGQFTVWLTWPYRTVGALAGFGATVVVCMIWRLVMHDNSKQHESREALAGPPVSNYLRDASATVFL AAWVPLFASFAALLVYPKDGAGRVFCLMIAVVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTATF LAGKTPWVGALLSFVLVLTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVVAWTMLTLLP
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family
Homologues:
Organism=Escherichia coli, GI87081696, Length=160, Percent_Identity=40.625, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1787677, Length=167, Percent_Identity=34.7305389221557, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CDSA_MYCLE (Q9CBU1)
Other databases:
- EMBL: AL583922 - PIR: G87107 - RefSeq: NP_302096.1 - EnsemblBacteria: EBMYCT00000028010 - GeneID: 909784 - GenomeReviews: AL450380_GR - KEGG: mle:ML1589 - NMPDR: fig|272631.1.peg.968 - Leproma: ML1589 - GeneTree: EBGT00050000017496 - HOGENOM: HBG732679 - OMA: KDMGTLL - ProtClustDB: CLSK792142 - BioCyc: MLEP272631:ML1589-MONOMER - BRENDA: 2.7.7.41 - InterPro: IPR000374
Pfam domain/function: PF01148 CTP_transf_1
EC number: =2.7.7.41
Molecular weight: Translated: 32972; Mature: 32841
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2a48f7c8)-; HASH(0x2a2d9660)-; HASH(0x2a3bf07c)-; HASH(0x29ea9fe8)-; HASH(0x298ea854)-; HASH(0x2a36d1ac)-; HASH(0x2a26c4e4)-; HASH(0x2a3c3fb4)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTDPGTGTPLDESVPGIKRAMRQSTKNTPRAGRNLPAAIAVGLSIGGVLVATLVFAPR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IWVVLCAGAIFVASHEVVRRLREAGYVIPAIPLLIGGQFTVWLTWPYRTVGALAGFGATV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH VVCMIWRLVMHDNSKQHESREALAGPPVSNYLRDASATVFLAAWVPLFASFAALLVYPKD HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GAGRVFCLMIAVVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTAT CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FLAGKTPWVGALLSFVLVLTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH AVVAWTMLTLLP HHHHHHHHHHCH >Mature Secondary Structure ASTDPGTGTPLDESVPGIKRAMRQSTKNTPRAGRNLPAAIAVGLSIGGVLVATLVFAPR CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IWVVLCAGAIFVASHEVVRRLREAGYVIPAIPLLIGGQFTVWLTWPYRTVGALAGFGATV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH VVCMIWRLVMHDNSKQHESREALAGPPVSNYLRDASATVFLAAWVPLFASFAALLVYPKD HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GAGRVFCLMIAVVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTAT CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FLAGKTPWVGALLSFVLVLTCTLGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH AVVAWTMLTLLP HHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002