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The map label for this gene is ydhO [C]

Identifier: 221229884

GI number: 221229884

Start: 1051006

End: 1052130

Strand: Direct

Name: ydhO [C]

Synonym: MLBr_00885

Alternate gene names: 221229884

Gene position: 1051006-1052130 (Clockwise)

Preceding gene: 221229883

Following gene: 221229885

Centisome position: 32.16

GC content: 61.07

Gene sequence:

>1125_bases
TTGAGACTTGGCTGCAAGCATCCGGTTGTGCGCCTGATTGCGCACTTTGTTGTCGGAACGCTAGTAGGGTTCGCTGTGTT
ATCTCGTTTCTTTGTCGCTACCGCGATGGCTGACCCTGCTGAGGACGCGCTGGCAAAACTTAACGAGCTGTCCCGCCAAG
CTGAGCAGACCACCGAAGCGGTGCACAGCGCGCAACTTGATCTGACTGAGAAGTTGGCAGCTCAGCGGGCGGCAGACAAG
AAGTACACGGACGACCAAGCTGCTCTGGCGGACGCCCAGGTGCGCTTGGCCACTTTCCAGGCTGCGGTCAACAAACTTGC
TGCCGCTACGTATATGAGTGGTCGTATAAACGGCATGACCGCTCTATTGACAGCATACTCACCGCAACAATTGATCAACA
AGTTGGCCCTACAGCGAGTGCTGGGTGTTCAAATGGCTACACAGATGGCCGGTTACCGGGACGCCGGGGAGCAGGCTGTT
AAGGCAGAGCAGACATCCGCTAAGTCCGCCGCTGACGCTAAGCACGCGGCCGACCAGGCTGCCGTGGTACGGGCGGGCTT
GCAGTCTAAGCAGAGTAAGTTGCAGCTCCAGATTGCGGTCGTCAAGTCGCACTACCTTTCGTTGTCGCCTAGGCAACGTA
CCACGCTTGCAGAGCCCGGGCCAGTCCCGGCGGTGGCTACTTTGCCCGGTGCGGCATCAGCTGGCGTTAGCCCGCCACCT
GATGCCGCACCACCCGGCGGATTACTCGGGGTTGCTCCAGCCCCTTTCGCAGGTGGTGGCGACCGCGCGGCTGTTGTGCA
GGCGGCACTGACCCAAATCGGAAGTCCATATGCTTGGGGTGGCGCGGCGCCCGGTGGATTCGACTGCTCCGGACTGGTGA
TGTGGGCTTACCAGCAGGCCGGCATTGCGCTGCCTCACTCCAGCCAGGCTCTGGCCCGCGGTGGTCAGCCGGTGTCGCTG
TCGGAACTGCAGCCCGGTGATGTGCTGACCTTCTATTCGGACGCGTCGCATGCCGGCATCTACGTTGGTGACGGTATGAT
GATCCATTCATCCACCTACGGTGTGCCGGTGCGGGTGGTGCCGATGAATTCGTCGGGTCCGATCTACGACGCCCGCCGCT
ACTAA

Upstream 100 bases:

>100_bases
TAACGATCACATTTGGACAACGTCGATATCATTTCGTAACCTGTTTGAGATCTAAAGCCCGCTCAATGGCCAAGTGCCTT
TGGCAGTTTAAGGAAAAGCT

Downstream 100 bases:

>100_bases
ACGCCTCGAACTGAGCTCACCTGCGCCAGGCTAGCCTGGCGCAGGTGAGCCGGGTCCTGCTGGTAACCAATGATTTTCCG
CCCCGCCGTGGTGGCATCCA

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRLGCKHPVVRLIAHFVVGTLVGFAVLSRFFVATAMADPAEDALAKLNELSRQAEQTTEAVHSAQLDLTEKLAAQRAADK
KYTDDQAALADAQVRLATFQAAVNKLAAATYMSGRINGMTALLTAYSPQQLINKLALQRVLGVQMATQMAGYRDAGEQAV
KAEQTSAKSAADAKHAADQAAVVRAGLQSKQSKLQLQIAVVKSHYLSLSPRQRTTLAEPGPVPAVATLPGAASAGVSPPP
DAAPPGGLLGVAPAPFAGGGDRAAVVQAALTQIGSPYAWGGAAPGGFDCSGLVMWAYQQAGIALPHSSQALARGGQPVSL
SELQPGDVLTFYSDASHAGIYVGDGMMIHSSTYGVPVRVVPMNSSGPIYDARRY

Sequences:

>Translated_374_residues
MRLGCKHPVVRLIAHFVVGTLVGFAVLSRFFVATAMADPAEDALAKLNELSRQAEQTTEAVHSAQLDLTEKLAAQRAADK
KYTDDQAALADAQVRLATFQAAVNKLAAATYMSGRINGMTALLTAYSPQQLINKLALQRVLGVQMATQMAGYRDAGEQAV
KAEQTSAKSAADAKHAADQAAVVRAGLQSKQSKLQLQIAVVKSHYLSLSPRQRTTLAEPGPVPAVATLPGAASAGVSPPP
DAAPPGGLLGVAPAPFAGGGDRAAVVQAALTQIGSPYAWGGAAPGGFDCSGLVMWAYQQAGIALPHSSQALARGGQPVSL
SELQPGDVLTFYSDASHAGIYVGDGMMIHSSTYGVPVRVVPMNSSGPIYDARRY
>Mature_374_residues
MRLGCKHPVVRLIAHFVVGTLVGFAVLSRFFVATAMADPAEDALAKLNELSRQAEQTTEAVHSAQLDLTEKLAAQRAADK
KYTDDQAALADAQVRLATFQAAVNKLAAATYMSGRINGMTALLTAYSPQQLINKLALQRVLGVQMATQMAGYRDAGEQAV
KAEQTSAKSAADAKHAADQAAVVRAGLQSKQSKLQLQIAVVKSHYLSLSPRQRTTLAEPGPVPAVATLPGAASAGVSPPP
DAAPPGGLLGVAPAPFAGGGDRAAVVQAALTQIGSPYAWGGAAPGGFDCSGLVMWAYQQAGIALPHSSQALARGGQPVSL
SELQPGDVLTFYSDASHAGIYVGDGMMIHSSTYGVPVRVVPMNSSGPIYDARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=102, Percent_Identity=38.2352941176471, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786421, Length=96, Percent_Identity=40.625, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 38769; Mature: 38769

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGCKHPVVRLIAHFVVGTLVGFAVLSRFFVATAMADPAEDALAKLNELSRQAEQTTEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VHSAQLDLTEKLAAQRAADKKYTDDQAALADAQVRLATFQAAVNKLAAATYMSGRINGMT
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALLTAYSPQQLINKLALQRVLGVQMATQMAGYRDAGEQAVKAEQTSAKSAADAKHAADQA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVRAGLQSKQSKLQLQIAVVKSHYLSLSPRQRTTLAEPGPVPAVATLPGAASAGVSPPP
HHHHHHHHHHHHHHEEEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
DAAPPGGLLGVAPAPFAGGGDRAAVVQAALTQIGSPYAWGGAAPGGFDCSGLVMWAYQQA
CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEHHC
GIALPHSSQALARGGQPVSLSELQPGDVLTFYSDASHAGIYVGDGMMIHSSTYGVPVRVV
CCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEECCCCCCEEEEE
PMNSSGPIYDARRY
EECCCCCCCCCCCC
>Mature Secondary Structure
MRLGCKHPVVRLIAHFVVGTLVGFAVLSRFFVATAMADPAEDALAKLNELSRQAEQTTEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VHSAQLDLTEKLAAQRAADKKYTDDQAALADAQVRLATFQAAVNKLAAATYMSGRINGMT
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALLTAYSPQQLINKLALQRVLGVQMATQMAGYRDAGEQAVKAEQTSAKSAADAKHAADQA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVRAGLQSKQSKLQLQIAVVKSHYLSLSPRQRTTLAEPGPVPAVATLPGAASAGVSPPP
HHHHHHHHHHHHHHEEEEEEEHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
DAAPPGGLLGVAPAPFAGGGDRAAVVQAALTQIGSPYAWGGAAPGGFDCSGLVMWAYQQA
CCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEHHC
GIALPHSSQALARGGQPVSLSELQPGDVLTFYSDASHAGIYVGDGMMIHSSTYGVPVRVV
CCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEECCCCCCEEEEE
PMNSSGPIYDARRY
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]