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The map label for this gene is ctaF [H]

Identifier: 221229876

GI number: 221229876

Start: 1040939

End: 1041358

Strand: Direct

Name: ctaF [H]

Synonym: MLBr_00876

Alternate gene names: 221229876

Gene position: 1040939-1041358 (Clockwise)

Preceding gene: 221229875

Following gene: 221229877

Centisome position: 31.85

GC content: 57.38

Gene sequence:

>420_bases
ATGCATATCGAAGCGAGGCTATTCGAGTTTGTCGCTGTGTTCTTTGTCATCATGGCGGTGCTGTATGGAGTGCTGACTTC
GATGTTCGCCACCGGTGGTGTGGATTGGGTCGGCACTACAGCCCTAGCGCTGACCGGAGGTCTAGCGTTGATCGTTGCCA
CCTTCTTTCGTTTTGTGGCTCGTCGGTTGGATATTCGACCAGAAGACTATGAAGGTGCTGAGATCAGTGATGGTGCAGGG
GAATTGGGGTTCTTCAGCCCGCACAGTTGGTGGCCGGTTCTGGTCGCCTTGTCGGGCTCGGTGGCGGCAGTCGGTATAGC
GCTGTGGCTGCCGTGGTTGATCGTTGCCGGAGTCGTGTTCGTTCTTGCCTCGGCAGCCGGACTGGTCTTCGAGTACTACG
TCGGCCCGGAGAAGCACTGA

Upstream 100 bases:

>100_bases
ACCCACCCGTTTGATACCCGTCGCGGACAGTTGACCAACAGCCAGTAGGTAGTCCCACTAAGGGTCCAGTAGGTAGTCCC
ACTAAGGGTTAGGACACGCA

Downstream 100 bases:

>100_bases
TTGGTCGGTACCGGATAAGGTCATAATTAGGGAACCAGTTGATTAGTGGGTAGTTCGCCAAGCTTGTTTGCCTTTCTCAG
TTCGGTAGGGTTGCCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MHIEARLFEFVAVFFVIMAVLYGVLTSMFATGGVDWVGTTALALTGGLALIVATFFRFVARRLDIRPEDYEGAEISDGAG
ELGFFSPHSWWPVLVALSGSVAAVGIALWLPWLIVAGVVFVLASAAGLVFEYYVGPEKH

Sequences:

>Translated_139_residues
MHIEARLFEFVAVFFVIMAVLYGVLTSMFATGGVDWVGTTALALTGGLALIVATFFRFVARRLDIRPEDYEGAEISDGAG
ELGFFSPHSWWPVLVALSGSVAAVGIALWLPWLIVAGVVFVLASAAGLVFEYYVGPEKH
>Mature_139_residues
MHIEARLFEFVAVFFVIMAVLYGVLTSMFATGGVDWVGTTALALTGGLALIVATFFRFVARRLDIRPEDYEGAEISDGAG
ELGFFSPHSWWPVLVALSGSVAAVGIALWLPWLIVAGVVFVLASAAGLVFEYYVGPEKH

Specific function: Part of cytochrome c oxidase, its function is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021050 [H]

Pfam domain/function: PF12270 Cyt_c_ox_IV [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 14970; Mature: 14970

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIEARLFEFVAVFFVIMAVLYGVLTSMFATGGVDWVGTTALALTGGLALIVATFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRLDIRPEDYEGAEISDGAGELGFFSPHSWWPVLVALSGSVAAVGIALWLPWLIVAGVVF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLASAAGLVFEYYVGPEKH
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHIEARLFEFVAVFFVIMAVLYGVLTSMFATGGVDWVGTTALALTGGLALIVATFFRFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RRLDIRPEDYEGAEISDGAGELGFFSPHSWWPVLVALSGSVAAVGIALWLPWLIVAGVVF
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLASAAGLVFEYYVGPEKH
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]