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The map label for this gene is yfcH [C]

Identifier: 221229862

GI number: 221229862

Start: 1022225

End: 1023148

Strand: Reverse

Name: yfcH [C]

Synonym: MLBr_00860

Alternate gene names: 221229862

Gene position: 1023148-1022225 (Counterclockwise)

Preceding gene: 221229863

Following gene: 221229861

Centisome position: 31.31

GC content: 61.8

Gene sequence:

>924_bases
GTGGCTCAAGCTAGTCGTAAGGCCGTTGTCGCGATAGCGGGTTCGTCCGGCATGATCGGCTCTGCTTTGGCCGCGGCGCT
GCGCGCTAACGATCACCTGGTGTTGCGCATCGTGCGCCGGACGCCGGCTAACGCCGAAGAACTGCACTGGAATCCCGAAA
GCGGTGAGTTCGATACCGACGCAATAACCGACGTCGATGCTGTCGTTAACCTTTGCGGAGTCAACCTGGGCCAGCGTCGG
TGGTCAGGCTCCTTCAAGCAGAACCTACGGGACAGCCGCATCACTCCGACCGAAGTGCTGTCTGCCGCGGTCGCGGAAGC
TGGTGTCAAAACCTTCATCAACGCCAGCGCGGTGGGCTACTATGGAAACACGCGGGATCGCGTGGTCGATGAAAATGACC
GAGCAGGAACAGGTTTCCTGGCCCAGCTGTGCCAGGACTGGGAGGGTGCCACGCTGCCGGCTCAATACGCCGGTACCCGT
GTGATACTCGCCCGAACAGGCATGGTGTTGGCTCAAGAGGCTGGTGTACTGAGCCGGATGCGGCCGTTGTTTTCTTTCGC
CTTAGGCGCCCGGATAGGCAACGGCCGTCAGTACATGTCGTGGATAAGCCTCGAAGATGAAGTGCGGGCGCTGCTATTCG
CTATCTCGCACCAATCGCTCTCCGGCCCATTAAATCTGACCGGCCCTGCACCTGTCACCAATGCGGAGTTCACCACCGCA
TTCGGTCGCGCAATCAACCGCCCGACTCCGTTGATGCTGCCCAGTTTCGCGGTGCGGGCCGCCCTCGGAGAGTTCGCCGA
CGAAGGGCTGCTCATCGGTCAGCGCGCCATCCCTGCCGCGCTGGAGCGCGCTGGTTTCCAGTTCCACCACAACACCATCG
GTGAGGCGCTCAGTTACGCGACCACCCGACCGAGCCAGAACTAG

Upstream 100 bases:

>100_bases
CGACGGCGCCGATGCCGGACGTTTCCTCACTACCATCAAGCACCGGCTCGAAGAGGGAGCATTCGAGGCCGACCTAGGTC
TTTAGGAGAGGCTTGCCAAC

Downstream 100 bases:

>100_bases
GCTCGGGCCGCAACACACCCGACGACCCAAACACCCACAGGCTACGGGTAGCCTGGGCTCCGTGATGGATTCCATCCGGT
CGATCCCGACCGCGATCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFDTDAITDVDAVVNLCGVNLGQRR
WSGSFKQNLRDSRITPTEVLSAAVAEAGVKTFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTR
VILARTGMVLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTGPAPVTNAEFTTA
FGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQFHHNTIGEALSYATTRPSQN

Sequences:

>Translated_307_residues
MAQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFDTDAITDVDAVVNLCGVNLGQRR
WSGSFKQNLRDSRITPTEVLSAAVAEAGVKTFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTR
VILARTGMVLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTGPAPVTNAEFTTA
FGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQFHHNTIGEALSYATTRPSQN
>Mature_306_residues
AQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFDTDAITDVDAVVNLCGVNLGQRRW
SGSFKQNLRDSRITPTEVLSAAVAEAGVKTFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRV
ILARTGMVLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTGPAPVTNAEFTTAF
GRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQFHHNTIGEALSYATTRPSQN

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily

Homologues:

Organism=Homo sapiens, GI116812630, Length=295, Percent_Identity=32.5423728813559, Blast_Score=133, Evalue=2e-31,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=37.037037037037, Blast_Score=181, Evalue=6e-47,
Organism=Drosophila melanogaster, GI28573846, Length=308, Percent_Identity=30.8441558441558, Blast_Score=145, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y860_MYCLE (O32960)

Other databases:

- EMBL:   Z98741
- EMBL:   AL583920
- PIR:   T44893
- RefSeq:   NP_301648.1
- ProteinModelPortal:   O32960
- EnsemblBacteria:   EBMYCT00000028131
- GeneID:   909856
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML0860
- NMPDR:   fig|272631.1.peg.520
- Leproma:   ML0860
- GeneTree:   EBGT00050000015197
- HOGENOM:   HBG462742
- OMA:   PPHTFIS
- ProtClustDB:   CLSK2299988
- BioCyc:   MLEP272631:ML0860-MONOMER
- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099
- Gene3D:   G3DSA:3.40.50.720
- PANTHER:   PTHR11092
- TIGRFAMs:   TIGR01777

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase

EC number: NA

Molecular weight: Translated: 32854; Mature: 32722

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFDTD
CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHEECCCCCCCCCCH
AITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVLSAAVAEAGVKTFINASAVGY
HHHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
YGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRVILARTGMVLAQEAGVLSRM
CCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHH
RPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTGPAPVTNAEFTTA
HHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
FGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQFHHNTIGEALSYA
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEHHHHHHHHHHHH
TTRPSQN
CCCCCCC
>Mature Secondary Structure 
AQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFDTD
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHEECCCCCCCCCCH
AITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVLSAAVAEAGVKTFINASAVGY
HHHHHHHHHHHHCCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
YGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRVILARTGMVLAQEAGVLSRM
CCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHH
RPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNLTGPAPVTNAEFTTA
HHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
FGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGFQFHHNTIGEALSYA
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEHHHHHHHHHHHH
TTRPSQN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002